C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYND-type containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000004838 ZMYND10 9606 - 3:50341110-50346852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231749 ZMYND10-001 50341110-50346852 protein_coding
  ENST00000360165 ZMYND10-002 50341114-50345732 protein_coding
  ENST00000431869 ZMYND10-006 50343401-50345721 nonsense_mediated_decay
  ENST00000442887 ZMYND10-003 50342037-50345721 protein_coding
  ENST00000443080 ZMYND10-007 50342522-50345672 nonsense_mediated_decay
  ENST00000468182 ZMYND10-008 50344839-50345681 processed_transcript
  ENST00000475688 ZMYND10-005 50341115-50343168 retained_intron
  ENST00000478269 ZMYND10-009 50343169-50344036 retained_intron
  ENST00000490675 ZMYND10-010 50341110-50342448 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231749ENST00000360165ENST00000431869ENST00000442887ENST00000443080ENST00000475688ENST00000478269ENST00000490675
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231749 N/A 0.234±0.00 N/A N/A 0.095±0.00 0.035±0.00 0.069±0.00 N/A N/A N/A 0.218±0.07 N/A N/A
ENST00000360165 0.068±0.00 N/A 0.412±0.00 N/A N/A N/A N/A N/A 12.003±0.00 0.137±0.00 6.159±0.00 N/A 117.792±65.65
ENST00000431869 N/A N/A N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A
ENST00000442887 0.054±0.00 0.158±0.00 0.702±0.00 0.247±0.00 N/A 0.022±0.00 0.407±0.00 0.118±0.00 13.768±0.00 N/A 3.224±3.12 0.124±0.01 79.772±16.39
ENST00000443080 N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A 0.315±0.00 N/A 0.299±0.00 N/A N/A
ENST00000475688 N/A 0.152±0.00 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.198±0.00 N/A N/A
ENST00000478269 N/A N/A 0.658±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490675 N/A N/A 1.985±0.00 0.392±0.16 0.231±0.09 0.161±0.11 0.917±0.00 0.132±0.00 22.714±0.00 N/A 3.834±3.46 0.159±0.04 82.706±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0034451 ISS centriolar satellite
GO:0036158 IMP outer dynein arm assembly
GO:0036159 IMP inner dynein arm assembly
GO:0044458 IMP motile cilium assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002406 zmynd10 zinc finger, MYND-type containing 10 protein_coding Danio_rerio
ENSMUSG00000010044 Zmynd10 zinc finger, MYND domain containing 10 protein_coding Mus_musculus

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