C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THUMP domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000066654 THUMPD1 9606 - 16:20733664-20742084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381337 THUMPD1-001 20733664-20742084 protein_coding
  ENST00000396083 THUMPD1-002 20735375-20741796 protein_coding
  ENST00000565248 THUMPD1-005 20737089-20741803 nonsense_mediated_decay
  ENST00000569768 THUMPD1-004 20738744-20741815 retained_intron
  ENST00000570231 THUMPD1-003 20736812-20738272 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381337ENST00000396083ENST00000570231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381337 2.866±0.00 4.230±0.00 N/A 1.548±0.10 3.963±0.83 5.640±0.52 2.535±0.00 3.963±1.54 4.522±2.43 3.605±1.05 2.700±0.00 4.236±2.30 4.557±1.77 8.277±0.20
ENST00000396083 N/A N/A N/A N/A 2.532±0.00 1.741±0.00 N/A N/A 4.643±0.00 N/A N/A N/A N/A 2.355±0.00
ENST00000570231 N/A N/A 6.915±0.00 4.557±0.00 5.109±0.00 4.532±0.00 2.189±0.00 2.681±0.00 4.813±0.00 5.617±0.00 1.255±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045625 thumpd1 THUMP domain containing 1 protein_coding Danio_rerio
ENSMUSG00000030942 Thumpd1 THUMP domain containing 1 protein_coding Mus_musculus

Loading