C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000079462 PAFAH1B3 9606 - 19:42297033-42303546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262890 PAFAH1B3-001 42297033-42302571 protein_coding
  ENST00000538771 PAFAH1B3-201 42297033-42302777 protein_coding
  ENST00000594989 PAFAH1B3-007 42297036-42302292 protein_coding
  ENST00000595530 PAFAH1B3-004 42297280-42302770 protein_coding
  ENST00000596265 PAFAH1B3-006 42297316-42302728 protein_coding
  ENST00000597333 PAFAH1B3-005 42299917-42302496 retained_intron
  ENST00000599778 PAFAH1B3-002 42300171-42303546 protein_coding
  ENST00000601865 PAFAH1B3-003 42300089-42302777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262890ENST00000538771ENST00000594989ENST00000595530ENST00000596265ENST00000599778ENST00000601865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262890 1.088±0.00 N/A N/A 6.340±0.00 1.925±0.00 2.310±0.00 0.412±0.00 2.925±0.00 N/A N/A N/A 10.101±4.83 6.994±0.00 N/A
ENST00000538771 N/A 10.003±0.00 N/A 0.854±0.00 0.907±0.07 3.228±0.00 0.258±0.00 N/A N/A 2.835±0.00 N/A 8.283±4.73 4.543±2.67 13.448±3.18
ENST00000594989 1.457±0.00 N/A N/A 7.386±3.03 2.149±0.00 2.398±0.00 N/A 7.531±0.00 2.003±0.00 0.981±0.00 2.481±0.00 N/A 2.754±0.00 16.115±0.00
ENST00000595530 1.240±0.00 N/A 1.164±0.00 1.717±0.00 1.130±0.00 2.881±0.13 N/A 5.641±0.00 N/A N/A 0.986±0.61 9.443±4.61 6.445±3.38 13.823±0.00
ENST00000596265 N/A N/A N/A 1.917±0.00 N/A 2.173±0.00 N/A 0.785±0.00 N/A 0.158±0.00 N/A N/A N/A N/A
ENST00000599778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.559±0.00 N/A N/A
ENST00000601865 N/A N/A 0.154±0.00 N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V7 CIL_0005V7_0001 CGP 19:42268537-42303546
CIL_0005V8 CIL_0005V8_0001 CGP 19:42297033-42310821

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003847 IEA 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006629 TAS lipid metabolic process
GO:0007283 IEA spermatogenesis
GO:0007399 TAS nervous system development
GO:0007420 IEA brain development
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016042 IEA lipid catabolic process
GO:0016787 IEA hydrolase activity
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058047 pafah1b3 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit protein_coding Danio_rerio
ENSMUSG00000005447 Pafah1b3 platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 protein_coding Mus_musculus

Loading