C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor EC
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105967 TFEC 9606 - 7:115935148-116159896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265440 TFEC-001 115935148-116030741 protein_coding
  ENST00000320239 TFEC-007 115935156-116030813 protein_coding
  ENST00000393485 TFEC-002 115939949-116030744 protein_coding
  ENST00000457268 TFEC-201 115935148-115968313 protein_coding
  ENST00000462828 TFEC-006 115939949-115950894 processed_transcript
  ENST00000465322 TFEC-005 116120190-116159895 processed_transcript
  ENST00000474337 TFEC-004 116110773-116159895 processed_transcript
  ENST00000484212 TFEC-008 115941756-116159896 protein_coding
  ENST00000497829 TFEC-009 115956749-115968313 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265440ENST00000320239ENST00000393485ENST00000457268ENST00000462828ENST00000484212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265440 0.120±0.00 0.359±0.00 N/A 0.142±0.00 1.251±0.00 N/A 0.184±0.05 N/A 0.268±0.15 3.365±0.00 N/A 0.129±0.01 0.315±0.11 0.147±0.00
ENST00000320239 0.098±0.00 N/A N/A 0.127±0.00 0.068±0.00 0.105±0.00 0.039±0.00 0.409±0.00 N/A 0.336±0.00 N/A 0.141±0.00 N/A N/A
ENST00000393485 N/A 0.377±0.00 N/A 0.106±0.00 N/A N/A 0.109±0.00 0.235±0.00 0.127±0.00 0.378±0.00 N/A 0.180±0.10 0.331±0.18 0.270±0.00
ENST00000457268 N/A N/A 2.984±0.00 N/A N/A N/A N/A 1.354±0.00 N/A N/A 0.018±0.00 0.038±0.00 N/A N/A
ENST00000462828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00
ENST00000484212 N/A N/A N/A N/A 1.328±0.00 N/A N/A N/A N/A N/A N/A 0.334±0.17 N/A 0.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000410 CIL_000410_0001 CGP 7:114922154-116159896
CIL_0007K6 CIL_0007K6_0002 UCNEbase 7:114986759-116135792
CIL_000998 CIL_000998_0001 VISTA 7:115355213-115956543
CIL_0008UX CIL_0008UX_0001 VISTA 7:115373184-115975002
CIL_0008E4 CIL_0008E4_0001 VISTA 7:115511477-116114742
CIL_0007VN CIL_0007VN_0001 VISTA 7:115642067-116242568
CIL_00040R CIL_00040R_0001 CGP 7:115935148-116258783

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003713 TAS transcription coactivator activity
GO:0003714 TAS transcription corepressor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0034605 IEA cellular response to heat
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008423 tfec transcription factor EC protein_coding Danio_rerio
ENSMUSG00000029553 Tfec transcription factor EC protein_coding Mus_musculus

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