C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poliovirus receptor-related 1 (herpesvirus entry mediator C)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110400 PVRL1 9606 - 11:119623408-119729084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264025 PVRL1-002 119660992-119729084 protein_coding
  ENST00000340882 PVRL1-003 119674592-119728553 protein_coding
  ENST00000341398 PVRL1-001 119638098-119728553 protein_coding
  ENST00000524429 PVRL1-005 119674382-119675669 retained_intron
  ENST00000524510 PVRL1-004 119677095-119687357 processed_transcript
  ENST00000531468 PVRL1-007 119623408-119638200 processed_transcript
  ENST00000532197 PVRL1-006 119676815-119677601 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000264025ENST00000340882ENST00000524510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000264025 0.550±0.00 1.563±0.00 0.424±0.00 9.529±8.20 3.137±1.96 0.808±0.33 2.357±2.11 1.623±1.50 0.964±0.47 1.497±1.42 4.342±1.91 4.165±0.47 1.241±0.00
ENST00000340882 N/A N/A N/A N/A N/A N/A N/A 1.190±0.00 1.761±0.00 N/A 1.930±0.00 N/A N/A
ENST00000524510 N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A 1.300±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099Y CIL_00099Y_0001 VISTA 11:119589021-120192949

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0002089 IEA lens morphogenesis in camera-type eye
GO:0002934 IEA desmosome organization
GO:0004872 IEA receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005912 NAS adherens junction
GO:0005913 IDA cell-cell adherens junction
GO:0006826 IEA iron ion transport
GO:0006955 NAS immune response
GO:0007155 NAS cell adhesion
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007165 TAS signal transduction
GO:0007411 IEA axon guidance
GO:0009615 IEA response to virus
GO:0015026 TAS coreceptor activity
GO:0016020 TAS membrane
GO:0016021 NAS integral component of membrane
GO:0016337 NAS single organismal cell-cell adhesion
GO:0016342 IEA catenin complex
GO:0030246 IEA carbohydrate binding
GO:0030424 IEA axon
GO:0032584 IEA growth cone membrane
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0042803 ISS protein homodimerization activity
GO:0043005 IEA neuron projection
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045202 IEA synapse
GO:0045216 TAS cell-cell junction organization
GO:0046718 NAS viral entry into host cell
GO:0046790 IEA virion binding
GO:0046982 IEA protein heterodimerization activity
GO:0048593 IEA camera-type eye morphogenesis
GO:0050839 IPI cell adhesion molecule binding
GO:0051963 IEA regulation of synapse assembly
GO:0060041 IEA retina development in camera-type eye
GO:0070166 IEA enamel mineralization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052630 pvrl1b poliovirus receptor-related 1b protein_coding Danio_rerio
ENSDARG00000069767 pvrl1a poliovirus receptor-related 1a protein_coding Danio_rerio
ENSMUSG00000032012 Pvrl1 poliovirus receptor-related 1 protein_coding Mus_musculus

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