C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114520 SNX4 9606 - 3:125446644-125520197 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251775 SNX4-001 125446644-125520197 protein_coding
  ENST00000465505 SNX4-005 125476695-125504744 nonsense_mediated_decay
  ENST00000471751 SNX4-002 125447711-125520181 nonsense_mediated_decay
  ENST00000473417 SNX4-003 125469444-125520191 processed_transcript
  ENST00000482965 SNX4-004 125449070-125460801 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251775ENST00000471751ENST00000473417ENST00000482965
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251775 4.874±0.00 4.258±0.00 2.772±0.00 7.748±1.03 4.460±0.67 3.642±0.38 2.562±1.40 10.965±2.13 6.443±2.52 4.720±0.92 1.714±1.51 5.729±2.49 9.105±2.14 8.438±0.00
ENST00000471751 4.552±0.00 N/A N/A 8.255±0.00 5.775±0.00 3.602±0.00 2.096±0.00 5.425±0.00 N/A 2.756±1.20 1.500±0.00 6.851±2.26 7.759±0.00 8.875±3.08
ENST00000473417 N/A N/A 10.910±0.00 N/A 8.622±0.00 4.821±0.00 1.704±0.00 5.425±0.00 2.311±0.00 6.869±0.00 N/A N/A N/A N/A
ENST00000482965 N/A 6.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.472±0.00 10.974±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005154 IDA epidermal growth factor receptor binding
GO:0005158 IDA insulin receptor binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005868 IDA cytoplasmic dynein complex
GO:0006886 IBA intracellular protein transport
GO:0015031 IMP protein transport
GO:0016020 IDA membrane
GO:0031901 IDA early endosome membrane
GO:0032456 IMP endocytic recycling
GO:0035091 IMP:IEA phosphatidylinositol binding
GO:0043234 IDA protein complex
GO:1990459 IDA transferrin receptor binding
GO:1990460 IDA leptin receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022659 snx4 sorting nexin 4 protein_coding Danio_rerio
ENSMUSG00000022808 Snx4 sorting nexin 4 protein_coding Mus_musculus

Loading