C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysosomal-associated membrane protein family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125869 LAMP5 9606 + 20:9514358-9530524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246070 LAMP5-001 9514361-9530524 protein_coding
  ENST00000427562 LAMP5-002 9514358-9529923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000246070ENST00000427562
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000246070 N/A 0.520±0.00 0.143±0.00 20.769±4.07 0.521±0.24 0.826±0.00 0.048±0.00 0.527±0.00 0.616±0.00 9.647±10.83 0.547±0.51 0.875±0.64
ENST00000427562 0.070±0.00 N/A 0.125±0.00 N/A N/A 0.166±0.00 N/A N/A 0.339±0.00 N/A 0.055±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043I CIL_00043I_0001 CGP 20:9068763-9530524
CIL_00035V CIL_00035V_0001 CGP 20:9514358-9839041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0031901 ISS early endosome membrane
GO:0032584 ISS growth cone membrane
GO:0032590 ISS dendrite membrane
GO:0033116 IDA endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0055038 ISS recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027270 Lamp5 lysosomal-associated membrane protein family, member 5 protein_coding Mus_musculus

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