C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hepatoma-derived growth factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143321 HDGF 9606 - 1:156742107-156766925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357325 HDGF-001 156742107-156751744 protein_coding
  ENST00000368206 HDGF-003 156743345-156752448 protein_coding
  ENST00000368209 HDGF-002 156742110-156752233 protein_coding
  ENST00000465180 HDGF-009 156742526-156766925 processed_transcript
  ENST00000469145 HDGF-005 156743709-156751544 processed_transcript
  ENST00000471377 HDGF-004 156743803-156752272 processed_transcript
  ENST00000477306 HDGF-008 156743307-156744276 processed_transcript
  ENST00000482651 HDGF-006 156743156-156747471 processed_transcript
  ENST00000495212 HDGF-007 156743841-156751496 processed_transcript
  ENST00000537739 HDGF-201 156742110-156751598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357325ENST00000471377ENST00000537739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357325 N/A N/A 3.131±0.00 N/A N/A 7.828±0.00 31.199±21.27 31.342±27.64 63.209±0.00 86.234±79.10 38.627±30.91 64.521±15.46 35.359±14.79 10.583±0.00
ENST00000471377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.142±0.00 N/A
ENST00000537739 38.989±0.00 35.511±0.00 4.706±0.00 17.580±7.89 24.277±12.33 22.058±12.93 16.053±0.00 24.186±7.47 15.818±6.61 N/A 26.271±0.00 159.073±0.00 22.492±1.42 27.617±8.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000166 IEA nucleotide binding
GO:0001106 IDA RNA polymerase II transcription corepressor activity
GO:0001222 IPI transcription corepressor binding
GO:0003677 IEA DNA binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0007165 NAS signal transduction
GO:0008083 IEA growth factor activity
GO:0008201 IEA heparin binding
GO:0008283 TAS cell proliferation
GO:0017053 IDA transcriptional repressor complex
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

No Homologs available.

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