C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhophilin associated tail protein 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145491 ROPN1L 9606 + 5:10441524-10472029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274134 ROPN1L-001 10441876-10465028 protein_coding
  ENST00000503804 ROPN1L-002 10441524-10465024 protein_coding
  ENST00000510520 ROPN1L-005 10441876-10472029 processed_transcript
  ENST00000512022 ROPN1L-004 10442081-10461538 retained_intron
  ENST00000515762 ROPN1L-003 10441954-10461469 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000274134ENST00000503804ENST00000510520ENST00000512022ENST00000515762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000274134 0.780±0.00 1.487±0.00 N/A 0.565±0.16 0.156±0.00 N/A N/A N/A 0.317±0.00 12.640±0.00 3.120±3.06 0.391±0.17 118.060±14.55
ENST00000503804 N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A 0.160±0.00 N/A
ENST00000510520 N/A N/A N/A 0.053±0.00 N/A 0.180±0.00 N/A 0.132±0.00 N/A 0.902±0.00 N/A N/A N/A
ENST00000512022 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A 41.885±0.00
ENST00000515762 N/A N/A N/A 0.209±0.00 0.055±0.00 N/A 0.047±0.00 N/A N/A N/A 0.113±0.00 0.315±0.00 135.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VT CIL_0006VT_0002 CGP 5:10441524-10650196

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001932 IEA regulation of protein phosphorylation
GO:0003341 IEA cilium movement
GO:0003351 IC epithelial cilium movement
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030317 IEA sperm motility
GO:0031514 IDA motile cilium
GO:0048240 IEA sperm capacitation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058370 ropn1l ropporin 1-like protein_coding Danio_rerio
ENSMUSG00000022236 Ropn1l ropporin 1-like protein_coding Mus_musculus

Loading