C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nucleolar RNA host gene 11 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174365 SNHG11 9606 + 20:38446578-38450921 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359074 SNHG11-006 38446710-38450921 lincRNA
  ENST00000400436 SNHG11-007 38446654-38450921 retained_intron
  ENST00000418383 SNHG11-001 38446887-38448011 retained_intron
  ENST00000420006 SNHG11-015 38446710-38450857 lincRNA
  ENST00000421599 SNHG11-014 38446691-38450921 lincRNA
  ENST00000432153 SNHG11-005 38446724-38450921 lincRNA
  ENST00000434729 SNHG11-010 38446757-38450921 lincRNA
  ENST00000437028 SNHG11-013 38446727-38450921 retained_intron
  ENST00000440918 SNHG11-012 38446716-38450363 lincRNA
  ENST00000442419 SNHG11-009 38447538-38450921 retained_intron
  ENST00000444816 SNHG11-002 38448611-38450921 lincRNA
  ENST00000449351 SNHG11-011 38446701-38450921 lincRNA
  ENST00000453698 SNHG11-003 38446578-38450921 retained_intron
  ENST00000457218 SNHG11-004 38447314-38450921 lincRNA
  ENST00000483342 SNHG11-008 38446685-38450921 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359074ENST00000400436ENST00000418383ENST00000420006ENST00000421599ENST00000432153ENST00000434729ENST00000437028ENST00000440918ENST00000442419ENST00000444816ENST00000449351ENST00000457218ENST00000483342
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359074 N/A N/A N/A N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A 4.773±1.72 3.516±2.02 2.098±0.00
ENST00000400436 N/A 0.736±0.00 N/A N/A N/A N/A 0.060±0.04 0.401±0.00 0.075±0.00 0.201±0.09 N/A 1.093±0.00 N/A 0.835±0.00
ENST00000418383 N/A N/A N/A N/A N/A N/A 0.341±0.00 1.015±0.00 N/A N/A N/A N/A N/A N/A
ENST00000420006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 2.380±1.39 1.424±0.00 5.466±0.00
ENST00000421599 N/A N/A N/A N/A N/A N/A 0.780±0.00 N/A 0.804±0.00 N/A N/A N/A 1.286±0.00 N/A
ENST00000432153 1.234±0.00 1.092±0.00 N/A 4.220±0.00 1.587±0.00 0.484±0.00 0.079±0.00 1.871±0.00 0.786±0.00 N/A N/A 1.779±0.22 2.056±0.00 2.374±0.00
ENST00000434729 N/A 1.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.786±0.00 N/A
ENST00000437028 N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A 0.345±0.00 N/A N/A N/A N/A
ENST00000440918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.973±0.00
ENST00000442419 N/A N/A N/A N/A 0.872±0.00 N/A 0.211±0.00 N/A 1.147±0.00 0.612±0.00 N/A 2.415±0.00 N/A 1.842±0.00
ENST00000444816 1.176±0.00 3.733±0.00 0.166±0.00 N/A 0.994±0.15 N/A N/A N/A 1.323±0.00 0.185±0.00 2.418±0.00 N/A N/A N/A
ENST00000449351 1.033±0.00 N/A N/A 0.399±0.00 N/A 1.470±0.00 N/A 1.255±0.48 0.775±0.00 N/A N/A N/A N/A N/A
ENST00000457218 N/A N/A N/A 3.106±0.00 N/A N/A N/A 1.416±0.00 N/A 0.272±0.00 N/A N/A N/A 2.434±0.00
ENST00000483342 N/A N/A 0.081±0.00 0.358±0.00 1.189±0.00 N/A N/A 0.884±0.00 N/A 0.312±0.00 N/A 1.755±0.19 0.732±0.00 1.327±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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