C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rabaptin, RAB GTPase binding effector protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177548 RABEP2 9606 - 16:28904421-28936526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357573 RABEP2-006 28904421-28925214 protein_coding
  ENST00000358201 RABEP2-001 28904421-28925752 protein_coding
  ENST00000544477 RABEP2-002 28904828-28925196 protein_coding
  ENST00000561501 RABEP2-008 28914490-28924200 protein_coding
  ENST00000561803 RABEP2-016 28916176-28925214 processed_transcript
  ENST00000562475 RABEP2-011 28917837-28924711 processed_transcript
  ENST00000562590 RABEP2-005 28910287-28925684 retained_intron
  ENST00000563577 RABEP2-012 28919786-28924682 nonsense_mediated_decay
  ENST00000564473 RABEP2-010 28917823-28925177 processed_transcript
  ENST00000564579 RABEP2-013 28919695-28924710 retained_intron
  ENST00000566762 RABEP2-015 28914574-28936526 protein_coding
  ENST00000567483 RABEP2-007 28914259-28924937 protein_coding
  ENST00000568703 RABEP2-009 28914236-28924827 protein_coding
  ENST00000570030 RABEP2-014 28919688-28925216 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000357573ENST00000358201ENST00000544477ENST00000564473ENST00000564579ENST00000567483ENST00000568703ENST00000570030
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000357573 N/A N/A N/A N/A N/A N/A 0.111±0.00 0.595±0.00 N/A N/A N/A 5.068±0.00
ENST00000358201 2.516±0.00 0.633±0.00 1.188±0.41 N/A 3.144±0.00 1.920±1.77 6.165±0.00 0.390±0.00 2.125±0.63 4.898±3.05 3.685±2.13 N/A
ENST00000544477 1.732±0.00 N/A 2.543±0.00 N/A N/A N/A 2.739±2.72 N/A N/A 5.179±3.79 6.281±0.00 5.874±0.00
ENST00000564473 N/A N/A N/A N/A 1.766±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000564579 N/A 1.091±0.00 N/A 4.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567483 N/A 0.871±0.00 N/A N/A N/A 0.480±0.00 N/A N/A 1.816±0.00 5.187±4.36 8.539±0.00 N/A
ENST00000568703 N/A N/A N/A 2.161±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570030 N/A N/A N/A N/A N/A N/A N/A 1.620±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0006897 IEA endocytosis
GO:0008083 IEA growth factor activity
GO:0015031 IEA protein transport
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061213 rabep2 rabaptin, RAB GTPase binding effector protein 2 protein_coding Danio_rerio
ENSMUSG00000030727 Rabep2 rabaptin, RAB GTPase binding effector protein 2 protein_coding Mus_musculus

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