C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HIG1 hypoxia inducible domain family, member 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181061 HIGD1A 9606 - 3:42757177-42804531 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321331 HIGD1A-001 42784298-42804531 protein_coding
  ENST00000418900 HIGD1A-002 42784330-42804488 protein_coding
  ENST00000430190 HIGD1A-005 42784905-42804490 protein_coding
  ENST00000431549 HIGD1A-007 42757177-42804518 nonsense_mediated_decay
  ENST00000452906 HIGD1A-006 42785252-42804433 protein_coding
  ENST00000470543 HIGD1A-004 42784526-42804488 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321331ENST00000418900ENST00000430190ENST00000452906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321331 40.058±0.00 35.758±0.00 10.327±0.00 99.094±40.51 43.578±19.68 44.600±6.70 69.200±44.16 66.622±34.55 61.290±46.37 27.565±13.77 13.298±6.76 21.870±11.03 29.300±1.88 40.567±19.99
ENST00000418900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.351±0.00 41.939±0.00 12.898±0.00
ENST00000430190 N/A N/A 5.620±0.00 N/A N/A N/A 20.026±0.00 N/A 8.125±0.00 N/A N/A 26.055±0.00 N/A 41.144±0.00
ENST00000452906 N/A N/A 5.913±0.00 N/A N/A 14.272±0.00 N/A N/A N/A N/A 22.727±0.00 24.666±16.70 N/A 28.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EY CIL_0003EY_0001 CGP 3:42757177-42887974

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042149 IEA cellular response to glucose starvation
GO:0043066 IDA negative regulation of apoptotic process
GO:0043234 IDA protein complex
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain
GO:0071456 IEA cellular response to hypoxia
GO:0090201 IEA negative regulation of release of cytochrome c from mitochondria

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022303 hig1 hypoxia induced gene 1 protein_coding Danio_rerio
ENSMUSG00000038412 Higd1a HIG1 domain family, member 1A protein_coding Mus_musculus

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