C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptic vesicle glycoprotein 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185518 SV2B 9606 + 15:91099950-91301309 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330276 SV2B-201 91225870-91301308 protein_coding
  ENST00000394232 SV2B-001 91100285-91301309 protein_coding
  ENST00000545111 SV2B-002 91099950-91292636 protein_coding
  ENST00000553727 SV2B-005 91258477-91266948 retained_intron
  ENST00000557291 SV2B-004 91101828-91251926 processed_transcript
  ENST00000557410 SV2B-003 91100315-91295285 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330276ENST00000394232ENST00000545111ENST00000557410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330276 N/A N/A N/A 6.883±0.00 0.212±0.11 0.083±0.00 N/A 0.164±0.00 0.089±0.08 N/A 0.074±0.00 0.069±0.03 0.120±0.00 N/A
ENST00000394232 1.298±0.00 N/A N/A 10.733±5.10 0.256±0.00 N/A 0.124±0.00 N/A 0.004±0.00 N/A N/A 0.027±0.00 N/A N/A
ENST00000545111 N/A N/A 0.091±0.00 N/A N/A N/A 0.256±0.00 0.683±0.00 N/A 0.450±0.00 N/A N/A N/A N/A
ENST00000557410 3.271±0.00 1.468±0.00 0.031±0.00 12.791±0.48 0.715±0.32 0.541±0.39 0.680±0.27 0.056±0.00 0.216±0.14 0.230±0.16 0.039±0.03 0.216±0.17 0.508±0.14 0.542±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0001 VISTA 15:90522657-91123707

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0008021 ISS synaptic vesicle
GO:0016020 ISS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0030054 IEA cell junction
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057427 sv2ba synaptic vesicle glycoprotein 2 ba protein_coding Danio_rerio
ENSDARG00000060711 SV2B (2 of 3) synaptic vesicle glycoprotein 2B protein_coding Danio_rerio
ENSDARG00000090540 sv2bb synaptic vesicle glycoprotein 2 bb protein_coding Danio_rerio
ENSMUSG00000053025 Sv2b synaptic vesicle glycoprotein 2 b protein_coding Mus_musculus

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