C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myelin basic protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197971 MBP 9606 - 18:76978827-77133683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354542 MBP-032 76980327-77017261 protein_coding
  ENST00000355994 MBP-201 76978834-77132818 protein_coding
  ENST00000359645 MBP-001 76979767-77017042 protein_coding
  ENST00000382582 MBP-002 76978827-77017095 protein_coding
  ENST00000397860 MBP-005 77012779-77132769 protein_coding
  ENST00000397863 MBP-004 77012779-77131684 protein_coding
  ENST00000397865 MBP-007 76978861-77017086 protein_coding
  ENST00000397866 MBP-006 76978852-77017062 protein_coding
  ENST00000397868 MBP-011 76984728-77017055 retained_intron
  ENST00000397869 MBP-024 76980301-77017055 protein_coding
  ENST00000397875 MBP-019 76978852-77017055 protein_coding
  ENST00000447114 MBP-016 76984774-77010122 protein_coding
  ENST00000459948 MBP-022 76988494-77017061 nonsense_mediated_decay
  ENST00000467108 MBP-023 76988476-77017058 retained_intron
  ENST00000473302 MBP-020 76984808-77017055 nonsense_mediated_decay
  ENST00000482445 MBP-018 76989726-77017055 retained_intron
  ENST00000483025 MBP-017 76984813-77017055 nonsense_mediated_decay
  ENST00000484548 MBP-025 76987590-77017042 retained_intron
  ENST00000487778 MBP-012 77016979-77132814 processed_transcript
  ENST00000490319 MBP-008 76978834-76987956 retained_intron
  ENST00000490754 MBP-010 77017070-77133683 processed_transcript
  ENST00000493247 MBP-014 77065774-77087609 retained_intron
  ENST00000493623 MBP-021 76984854-77017055 nonsense_mediated_decay
  ENST00000495162 MBP-013 77017085-77087651 processed_transcript
  ENST00000497479 MBP-009 77017119-77133683 processed_transcript
  ENST00000498683 MBP-015 76989979-77017778 protein_coding
  ENST00000526111 MBP-028 76980353-77017065 protein_coding
  ENST00000527041 MBP-033 76979741-77017065 protein_coding
  ENST00000527975 MBP-030 76980275-77017058 nonsense_mediated_decay
  ENST00000528160 MBP-031 76980064-77017062 protein_coding
  ENST00000531144 MBP-027 76980337-77017065 nonsense_mediated_decay
  ENST00000533278 MBP-026 76980351-77017065 nonsense_mediated_decay
  ENST00000577755 MBP-041 76980235-77017000 nonsense_mediated_decay
  ENST00000578193 MBP-037 76980455-77017055 protein_coding
  ENST00000578715 MBP-042 76980292-76985487 processed_transcript
  ENST00000578873 MBP-039 76988410-77017055 protein_coding
  ENST00000579129 MBP-048 76980427-77132844 protein_coding
  ENST00000580402 MBP-049 76980427-77105261 protein_coding
  ENST00000580473 MBP-036 76984795-77087582 processed_transcript
  ENST00000581179 MBP-046 76984795-77017055 processed_transcript
  ENST00000581878 MBP-035 77016930-77127945 protein_coding
  ENST00000582282 MBP-043 76984804-77017051 processed_transcript
  ENST00000583118 MBP-044 76988321-77009900 retained_intron
  ENST00000583266 MBP-040 77005884-77017055 processed_transcript
  ENST00000583474 MBP-045 76980345-77017055 nonsense_mediated_decay
  ENST00000583798 MBP-034 77066312-77127712 protein_coding
  ENST00000585201 MBP-050 76978835-76990023 protein_coding
  ENST00000585216 MBP-038 76985250-77017055 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355994ENST00000397860ENST00000397863ENST00000397865ENST00000397866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.842±0.00 N/A N/A N/A
ENST00000397860 3.874±0.00 6.279±0.00 4.151±0.00 N/A 3.128±1.12 5.747±0.47 2.943±1.57 5.522±4.31 3.494±0.22 7.380±0.61 5.264±2.80 4.836±1.43 1.323±0.09 2.657±1.08
ENST00000397863 N/A N/A N/A N/A N/A N/A N/A 1.260±0.00 N/A N/A N/A N/A N/A N/A
ENST00000397865 9.938±0.00 N/A N/A 1195.840±0.00 N/A N/A N/A N/A 2.397±0.50 N/A 19.111±0.00 N/A N/A N/A
ENST00000397866 N/A N/A N/A 1738.758±1031.23 N/A N/A N/A N/A N/A N/A N/A N/A 3.382±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000017 CIL_000017_0002 CGP 18:76822607-77133683

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006955 TAS immune response
GO:0007268 TAS synaptic transmission
GO:0007417 TAS central nervous system development
GO:0007568 IEA aging
GO:0008366 TAS axon ensheathment
GO:0009636 IEA response to toxic substance
GO:0019911 IEA structural constituent of myelin sheath
GO:0021762 IEP substantia nigra development
GO:0032570 IEA response to progesterone
GO:0033269 IEA internode region of axon
GO:0034612 IEA response to tumor necrosis factor
GO:0042552 IEA myelination
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0043209 IEA myelin sheath
GO:0043218 IEA compact myelin
GO:0046689 IEA response to mercury ion
GO:0050771 IEA negative regulation of axonogenesis
GO:0061024 IEA membrane organization
GO:0070542 IEA response to fatty acid
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089413 mbpb myelin basic protein b protein_coding Danio_rerio
ENSMUSG00000041607 Mbp myelin basic protein protein_coding Mus_musculus

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