C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: patched domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204624 PTCHD2 9606 + 1:11479166-11537584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294484 PTCHD2-001 11479238-11537584 protein_coding
  ENST00000304391 PTCHD2-002 11533676-11537225 protein_coding
  ENST00000423056 PTCHD2-003 11479166-11481960 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000294484ENST00000304391ENST00000423056
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000294484 0.011±0.00 0.105±0.00 1.572±0.00 0.020±0.01 N/A 0.031±0.01 0.006±0.00 0.024±0.00 0.076±0.01 N/A 1.183±0.00
ENST00000304391 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A
ENST00000423056 N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A 0.063±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 ISS endoplasmic reticulum
GO:0007224 NAS smoothened signaling pathway
GO:0008158 IEA hedgehog receptor activity
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0031965 ISS nuclear membrane
GO:0032368 NAS regulation of lipid transport
GO:0042632 ISS cholesterol homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036999 PTCHD2 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000041544 Ptchd2 patched domain containing 2 protein_coding Mus_musculus

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