C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-related developmental regulator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214706 IFRD2 9606 - 3:50287732-50292918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414734 IFRD2-003 50288799-50292389 nonsense_mediated_decay
  ENST00000417626 IFRD2-001 50287732-50292595 protein_coding
  ENST00000426499 IFRD2-015 50287743-50288639 protein_coding
  ENST00000436390 IFRD2-002 50287743-50292918 protein_coding
  ENST00000438296 IFRD2-010 50288430-50290251 nonsense_mediated_decay
  ENST00000462001 IFRD2-007 50290009-50292436 retained_intron
  ENST00000464258 IFRD2-013 50288131-50289601 retained_intron
  ENST00000468737 IFRD2-005 50290181-50292056 processed_transcript
  ENST00000469855 IFRD2-014 50288663-50289263 retained_intron
  ENST00000474556 IFRD2-004 50287941-50292424 retained_intron
  ENST00000483071 IFRD2-009 50289208-50290070 retained_intron
  ENST00000484043 IFRD2-006 50290006-50292049 processed_transcript
  ENST00000486322 IFRD2-012 50288371-50289060 retained_intron
  ENST00000489569 IFRD2-008 50289248-50292420 retained_intron
  ENST00000492387 IFRD2-011 50288512-50289226 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417626ENST00000426499ENST00000436390ENST00000438296ENST00000464258ENST00000474556ENST00000483071ENST00000486322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417626 10.569±0.00 10.008±0.00 0.576±0.00 0.875±0.00 12.115±0.00 5.998±4.40 10.756±9.06 7.452±3.13 9.431±6.88 16.117±0.00 17.556±11.28 17.362±12.69 12.400±6.20 11.627±0.61
ENST00000426499 N/A 21.917±0.00 N/A N/A 10.637±0.00 N/A N/A 9.998±0.00 17.235±0.00 1.734±0.00 N/A N/A N/A N/A
ENST00000436390 N/A N/A N/A N/A 0.477±0.00 0.511±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438296 N/A N/A 1.702±0.00 N/A 9.414±6.01 N/A N/A 8.541±3.35 N/A N/A N/A N/A N/A N/A
ENST00000464258 N/A 17.066±0.00 2.131±0.00 N/A 1.799±0.00 N/A N/A N/A 9.771±0.00 10.760±7.94 N/A N/A 10.752±0.00 N/A
ENST00000474556 8.294±0.00 9.367±0.00 N/A 4.084±0.00 6.951±0.00 8.306±0.00 N/A N/A N/A N/A 12.002±0.00 N/A N/A N/A
ENST00000483071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.183±0.00 N/A N/A
ENST00000486322 N/A N/A N/A N/A N/A 2.819±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036811 ifrd2 interferon-related developmental regulator 2 protein_coding Danio_rerio
ENSMUSG00000010048 Ifrd2 interferon-related developmental regulator 2 protein_coding Mus_musculus

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