C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VI, alpha 4 pseudogene 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000228252 COL6A4P2 9606 + 3:130212823-130273806 unitary_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430317 COL6A4P2-004 130264442-130267441 processed_transcript
  ENST00000504443 COL6A4P2-001 130212823-130273186 unitary_pseudogene
  ENST00000507516 COL6A4P2-002 130214230-130245843 processed_transcript
  ENST00000509090 COL6A4P2-003 130245448-130248452 processed_transcript
  ENST00000509855 COL6A4P2-005 130273301-130273806 processed_transcript
  ENST00000542114 COL6A4P2-006 130244461-130251038 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000430317ENST00000504443ENST00000507516ENST00000509090ENST00000509855ENST00000542114
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000430317 N/A N/A N/A 0.116±0.00 N/A 0.033±0.00 N/A 0.219±0.00 N/A N/A 0.061±0.00 0.130±0.00
ENST00000504443 0.038±0.00 0.450±0.00 0.023±0.00 N/A 0.013±0.00 N/A N/A 0.144±0.00 0.051±0.00 0.296±0.16 N/A N/A
ENST00000507516 0.063±0.00 N/A 0.086±0.00 N/A 0.072±0.00 0.074±0.00 N/A N/A N/A 0.167±0.00 0.021±0.00 N/A
ENST00000509090 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509855 0.131±0.00 N/A 0.220±0.07 N/A N/A N/A 0.111±0.00 0.080±0.00 0.271±0.00 0.852±0.48 N/A 0.067±0.00
ENST00000542114 N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A 0.149±0.00 N/A N/A 0.049±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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