C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ZNF559-ZNF177 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000270011 ZNF559-ZNF177 9606 + 19:9324174-9382617 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000434737 ZNF559-ZNF177-201 9378256-9382615 protein_coding
  ENST00000446085 ZNF559-ZNF177-002 9324174-9382190 protein_coding
  ENST00000541595 ZNF559-ZNF177-001 9324341-9382617 protein_coding
  ENST00000593242 ZNF559-ZNF177-015 9324224-9379175 nonsense_mediated_decay
  ENST00000602856 ZNF559-ZNF177-202 9378256-9380615 protein_coding
  ENST00000603024 ZNF559-ZNF177-003 9324179-9378311 nonsense_mediated_decay
  ENST00000603099 ZNF559-ZNF177-004 9324177-9364909 processed_transcript
  ENST00000603656 ZNF559-ZNF177-014 9324291-9381190 protein_coding
  ENST00000603974 ZNF559-ZNF177-008 9324712-9380122 nonsense_mediated_decay
  ENST00000604543 ZNF559-ZNF177-013 9324198-9379053 nonsense_mediated_decay
  ENST00000604886 ZNF559-ZNF177-011 9324179-9379569 nonsense_mediated_decay
  ENST00000605006 ZNF559-ZNF177-009 9324197-9380121 nonsense_mediated_decay
  ENST00000605071 ZNF559-ZNF177-007 9324295-9371752 nonsense_mediated_decay
  ENST00000605093 ZNF559-ZNF177-010 9324202-9379683 nonsense_mediated_decay
  ENST00000605301 ZNF559-ZNF177-006 9324197-9364914 processed_transcript
  ENST00000605471 ZNF559-ZNF177-016 9324712-9380132 processed_transcript
  ENST00000605522 ZNF559-ZNF177-005 9324197-9364930 processed_transcript
  ENST00000605775 ZNF559-ZNF177-012 9324179-9378618 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyMuscleTestisENST00000434737ENST00000541595ENST00000602856ENST00000605301ENST00000605522
Transcript ID Brain Colon Kidney Muscle Testis
ENST00000434737 N/A 0.519±0.00 N/A N/A N/A
ENST00000541595 0.720±0.00 N/A N/A N/A N/A
ENST00000602856 N/A N/A N/A 1.458±0.00 26.902±0.00
ENST00000605301 N/A N/A 1.512±0.00 N/A N/A
ENST00000605522 N/A 3.349±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000097394 ZNF317 zinc finger protein 317 protein_coding Danio_rerio

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