C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin domain containing 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022498 Txndc11 10090 - 16:11074911-11134650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038424 Txndc11-001 11074911-11134650 protein_coding
  ENSMUST00000118362 Txndc11-002 11085519-11134611 protein_coding
  ENSMUST00000118679 Txndc11-003 11114063-11134613 protein_coding
  ENSMUST00000131012 Txndc11-005 11088272-11122737 processed_transcript
  ENSMUST00000145225 Txndc11-006 11087235-11134573 nonsense_mediated_decay
  ENSMUST00000146081 Txndc11-007 11084752-11087352 processed_transcript
  ENSMUST00000147884 Txndc11-004 11105957-11134650 nonsense_mediated_decay
  ENSMUST00000148183 Txndc11-008 11075425-11084785 retained_intron
  ENSMUST00000155221 Txndc11-009 11104611-11134553 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038424ENSMUST00000118362ENSMUST00000131012ENSMUST00000145225ENSMUST00000155221
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038424 10.016±1.49 9.530±3.75 6.390±1.57 10.843±2.60 15.630±5.22 4.492±0.25 10.956±0.92 8.389±2.34 9.831±2.98 1.264±0.73 15.745±4.78 18.060±5.13 3.922±0.25
ENSMUST00000118362 3.383±0.00 N/A 2.075±0.00 N/A N/A N/A N/A 1.926±0.54 N/A 0.396±0.08 3.408±0.14 3.668±1.28 N/A
ENSMUST00000131012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.406±0.00 N/A
ENSMUST00000145225 N/A 7.725±1.56 N/A N/A N/A N/A N/A N/A N/A N/A 8.796±0.20 N/A N/A
ENSMUST00000155221 N/A 28.441±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0003 CGP 16:10959275-11074983
CIL_00059Z CIL_00059Z_0002 CGP 16:11066298-11134650
CIL_0007DU CIL_0007DU_0002 CGP 16:11074911-11176393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IEA protein binding
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076938 txndc11 thioredoxin domain containing 11 protein_coding Danio_rerio
ENSG00000153066 TXNDC11 thioredoxin domain containing 11 protein_coding Homo_sapiens

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