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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB35, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029518 Rab35 10090 + 5:115631929-115647736 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031492 Rab35-001 115631929-115647736 protein_coding
  ENSMUST00000138885 Rab35-002 115632141-115646119 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031492ENSMUST00000138885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031492 28.339±1.94 34.823±3.85 19.695±2.01 27.981±5.53 35.082±10.75 31.962±19.16 8.473±5.71 23.862±1.57 14.739±6.90 35.517±1.11 7.547±1.64 35.323±9.56 24.892±6.44 3.089±2.07
ENSMUST00000138885 N/A N/A 9.578±0.61 34.485±17.86 N/A 10.996±0.00 8.041±0.00 N/A 11.716±4.47 N/A 3.730±0.00 21.567±14.51 24.303±11.86 8.772±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906
CIL_0004YR CIL_0004YR_0002 CGP 5:115565254-115647736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IEA cytokinesis
GO:0005515 IPI protein binding
GO:0005525 ISS GTP binding
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008104 IEA protein localization
GO:0010008 ISS endosome membrane
GO:0015031 IEA protein transport
GO:0016197 ISS endosomal transport
GO:0019003 ISS GDP binding
GO:0019882 IEA antigen processing and presentation
GO:0031175 IMP neuron projection development
GO:0031253 IEA cell projection membrane
GO:0036010 ISS protein localization to endosome
GO:0045171 IEA intercellular bridge
GO:0045334 IEA clathrin-coated endocytic vesicle
GO:0048227 IEA plasma membrane to endosome transport
GO:0070062 IEA extracellular vesicular exosome
GO:1990090 ISS cellular response to nerve growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058425 rab35b RAB35, member RAS oncogene family b protein_coding Danio_rerio
ENSDARG00000063142 RAB35 (2 of 2) RAB35, member RAS oncogene family protein_coding Danio_rerio
ENSG00000111737 RAB35 RAB35, member RAS oncogene family protein_coding Homo_sapiens

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