C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032112 Trappc4 10090 - 9:44403761-44407548 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034623 Trappc4-201 44403761-44407548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034623 26.270±3.13 33.769±3.49 23.830±4.55 43.859±14.46 25.855±2.84 19.892±1.38 14.192±0.52 23.611±2.58 14.779±4.62 17.738±2.89 6.073±0.84 21.321±3.07 26.959±3.40 23.426±6.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ME CIL_0003ME_0002 CGP 9:44398176-44407548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005795 IDA Golgi stack
GO:0005801 IEA cis-Golgi network
GO:0005886 TAS plasma membrane
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008021 IDA synaptic vesicle
GO:0016192 TAS vesicle-mediated transport
GO:0016358 IDA dendrite development
GO:0030008 IDA TRAPP complex
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0045212 TAS neurotransmitter receptor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027418 trappc4 trafficking protein particle complex 4 protein_coding Danio_rerio
ENSG00000196655 TRAPPC4 trafficking protein particle complex 4 protein_coding Homo_sapiens

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