C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fatty acid 2-hydroxylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033579 Fa2h 10090 - 8:111345135-111393824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038475 Fa2h-001 111345141-111393824 protein_coding
  ENSMUST00000159336 Fa2h-003 111345135-111366477 processed_transcript
  ENSMUST00000162216 Fa2h-004 111345765-111348057 processed_transcript
  ENSMUST00000162463 Fa2h-002 111347470-111393818 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038475ENSMUST00000159336ENSMUST00000162216ENSMUST00000162463
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038475 0.143±0.04 5.058±1.41 15.691±2.98 0.676±0.82 2.241±1.49 52.021±5.36 0.070±0.03 6.625±1.21 0.025±0.02 0.372±0.14 0.321±0.19 0.583±0.39 1.949±2.19 34.528±14.69
ENSMUST00000159336 0.017±0.00 N/A N/A 0.017±0.00 N/A N/A 0.013±0.01 N/A 0.016±0.00 N/A 0.189±0.08 0.198±0.00 0.187±0.00 N/A
ENSMUST00000162216 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.454±0.00 N/A 0.141±0.00 N/A
ENSMUST00000162463 0.217±0.06 9.742±3.29 N/A N/A 0.909±0.19 28.973±1.59 0.021±0.00 N/A 0.044±0.03 0.123±0.03 0.118±0.07 0.660±0.29 N/A 1.584±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000168 CIL_000168_0002 CGP 8:111311797-111393824
CIL_0002PJ CIL_0002PJ_0002 CGP 8:111345135-111522107

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001949 IMP sebaceous gland cell differentiation
GO:0005506 IEA iron ion binding
GO:0005783 IDA endoplasmic reticulum
GO:0006631 IDA fatty acid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006665 IEA sphingolipid metabolic process
GO:0016021 IEA integral component of membrane
GO:0020037 IEA heme binding
GO:0030258 IDA lipid modification
GO:0032286 IMP central nervous system myelin maintenance
GO:0032287 IMP peripheral nervous system myelin maintenance
GO:0042127 IMP regulation of cell proliferation
GO:0042634 IMP regulation of hair cycle
GO:0055114 IEA oxidation-reduction process
GO:0080132 IDA fatty acid alpha-hydroxylase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090063 fa2h fatty acid 2-hydroxylase protein_coding Danio_rerio
ENSG00000103089 FA2H fatty acid 2-hydroxylase protein_coding Homo_sapiens

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