C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034255 Arhgap27 10090 - 11:103331497-103363692 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041385 Arhgap27-005 103331500-103344702 protein_coding
  ENSMUST00000092557 Arhgap27-002 103359739-103363464 protein_coding
  ENSMUST00000107023 Arhgap27-003 103340135-103356375 protein_coding
  ENSMUST00000107024 Arhgap27-001 103331497-103360900 protein_coding
  ENSMUST00000116102 Arhgap27-011 103331498-103363692 retained_intron
  ENSMUST00000124490 Arhgap27-007 103337777-103339303 retained_intron
  ENSMUST00000136491 Arhgap27-004 103339229-103356361 protein_coding
  ENSMUST00000139830 Arhgap27-006 103335268-103339719 retained_intron
  ENSMUST00000144194 Arhgap27-008 103333465-103334089 retained_intron
  ENSMUST00000150122 Arhgap27-009 103333166-103334110 retained_intron
  ENSMUST00000163250 Arhgap27-010 103333229-103333395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041385ENSMUST00000116102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041385 7.849±1.45 6.497±0.47 8.982±0.09 1.965±0.10 16.412±3.55 53.468±5.54 3.845±1.27 11.333±0.63 1.850±0.56 19.645±0.55 2.852±0.00 7.534±1.51 14.753±8.47 0.541±0.00
ENSMUST00000116102 N/A N/A N/A N/A N/A N/A 1.030±0.08 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S1 CIL_0002S1_0002 CGP 11:103219762-103363692
CIL_0004D9 CIL_0004D9_0003 CGP 11:103331497-103412687

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 ISS intracellular
GO:0005737 IEA cytoplasm
GO:0006898 ISS receptor-mediated endocytosis
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0017124 ISS SH3 domain binding
GO:0030675 ISS Rac GTPase activator activity
GO:0032855 ISS positive regulation of Rac GTPase activity
GO:0043089 ISS positive regulation of Cdc42 GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061798 arhgap27l Rho GTPase activating protein 27, like protein_coding Danio_rerio
ENSDARG00000086142 arhgap27 Rho GTPase activating protein 27 protein_coding Danio_rerio
ENSG00000159314 ARHGAP27 Rho GTPase activating protein 27 protein_coding Homo_sapiens

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