C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tudor domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035517 Tdrd7 10090 + 4:45965334-46034761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102929 Tdrd7-002 45972233-46034761 protein_coding
  ENSMUST00000107777 Tdrd7-001 45965334-46034761 protein_coding
  ENSMUST00000140270 Tdrd7-004 45990163-46005592 processed_transcript
  ENSMUST00000151422 Tdrd7-003 45972834-45987622 processed_transcript
  ENSMUST00000155936 Tdrd7-005 46026101-46034761 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102929ENSMUST00000107777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102929 9.469±0.88 1.535±0.60 8.153±1.42 4.515±1.37 4.667±1.86 5.366±2.87 2.516±0.37 6.741±1.14 4.474±1.52 8.950±1.60 2.479±0.62 5.188±2.35 6.793±2.98 34.573±9.09
ENSMUST00000107777 N/A 2.559±1.33 N/A N/A 0.693±0.00 3.011±1.43 N/A N/A 1.064±0.55 1.336±0.00 N/A 3.575±2.54 6.153±1.54 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469
CIL_0002JB CIL_0002JB_0002 CGP 4:45890303-46034761
CIL_0007HJ CIL_0007HJ_0003 CGP 4:45965334-46116032

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002089 IMP lens morphogenesis in camera-type eye
GO:0003729 ISS mRNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005759 IEA mitochondrial matrix
GO:0007281 IDA germ cell development
GO:0007283 IMP spermatogenesis
GO:0010608 ISS posttranscriptional regulation of gene expression
GO:0030529 IDA ribonucleoprotein complex
GO:0033391 IDA chromatoid body
GO:0035770 ISS ribonucleoprotein granule
GO:0043186 IDA P granule
GO:0047485 IEA protein N-terminus binding
GO:0070306 IMP lens fiber cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032808 tdrd7 tudor domain containing 7 protein_coding Danio_rerio
ENSDARG00000077523 TDRD7B Tudor domain-containing protein 7B protein_coding Danio_rerio
ENSG00000196116 TDRD7 tudor domain containing 7 protein_coding Homo_sapiens

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