C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2300002M23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039269 2300002M23Rik 10090 + 17:35567450-35568952 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044326 2300002M23Rik-001 35567450-35568952 protein_coding
  ENSMUST00000174246 2300002M23Rik-002 35567485-35568930 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLungOvaryPlacentaTestisENSMUST00000044326ENSMUST00000174246
Transcript ID Adipose Brain Kidney Lung Ovary Placenta Testis
ENSMUST00000044326 0.025±0.00 0.024±0.00 0.056±0.02 8.833±0.44 7.229±1.69 0.022±0.02 0.980±0.07
ENSMUST00000174246 N/A 0.005±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001968 IDA fibronectin binding
GO:0005518 IDA collagen binding
GO:0005539 IDA glycosaminoglycan binding
GO:0005540 IDA hyaluronic acid binding
GO:0005614 IDA interstitial matrix
GO:0008201 IDA heparin binding
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0043236 IDA laminin binding
GO:0070052 IDA collagen V binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204542 C6orf15 chromosome 6 open reading frame 15 protein_coding Homo_sapiens

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