C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 65, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074577 Fam65c 10090 - 2:167980164-168010618 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099073 Fam65c-002 167980166-168010618 protein_coding
  ENSMUST00000123782 Fam65c-001 167980164-168010618 processed_transcript
  ENSMUST00000131572 Fam65c-003 167985058-167986755 retained_intron
  ENSMUST00000142702 Fam65c-004 167988802-167991347 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099073ENSMUST00000123782ENSMUST00000131572ENSMUST00000142702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099073 0.728±0.44 0.241±0.00 1.595±0.60 0.165±0.00 1.920±0.50 0.678±0.37 0.195±0.09 1.979±0.63 0.608±0.34 0.198±0.05 0.023±0.00 0.613±0.24 1.337±1.41 0.082±0.01
ENSMUST00000123782 N/A 0.164±0.00 N/A 0.103±0.00 N/A N/A 0.317±0.00 N/A N/A N/A 0.122±0.09 N/A 0.464±0.00 0.067±0.06
ENSMUST00000131572 N/A 0.966±0.09 N/A N/A N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A 0.179±0.04
ENSMUST00000142702 N/A 0.535±0.01 2.028±0.00 N/A 2.137±0.09 0.584±0.07 0.235±0.00 N/A N/A 1.348±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0007VZ CIL_0007VZ_0002 VISTA 2:167749064-168350864
CIL_0007GS CIL_0007GS_0002 CGP 2:167932057-168010618
CIL_000170 CIL_000170_0002 CGP 2:167980164-168101203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020979 FAM65C family with sequence similarity 65, member C protein_coding Danio_rerio
ENSG00000042062 FAM65C family with sequence similarity 65, member C protein_coding Homo_sapiens

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