C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077817-ENSDARG00000076928 CGP 7955 1:25135780-25269817
GeneTranscriptPositionBiotype
ENSDARG00000076928 (tet2)
tet methylcytosine dioxygenase 2 		ENSDART00000113020 (tet2-201) 25256874-25269817 protein_coding
ENSDARG00000077817 (cxxc4)
CXXC finger 4 		ENSDART00000112899 (cxxc4-201) 25135780-25175791 protein_coding
ENSDARG00000084721 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120121 (5S_rRNA.798-201) 25233114-25233229 rRNA
CIL_00002E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168772-ENSG00000168769 CGP 9606 4:104468312-105279816
GeneTranscriptPositionBiotype
ENSG00000168769 (TET2)
tet methylcytosine dioxygenase 2 		ENST00000265149 (TET2-005) 105146786-105279803 nonsense_mediated_decay
ENST00000305737 (TET2-001) 105145875-105242771 protein_coding
ENST00000380013 (TET2-002) 105146786-105279803 protein_coding
ENST00000394764 (TET2-201) 105146923-105242762 protein_coding
ENST00000413648 (TET2-004) 105146886-105242762 protein_coding
ENST00000504042 (TET2-007) 105146878-105202546 processed_transcript
ENST00000505801 (TET2-008) 105146933-105190703 retained_intron
ENST00000513237 (TET2-003) 105146293-105279816 protein_coding
ENST00000514870 (TET2-006) 105147457-105234272 protein_coding
ENST00000540549 (TET2-202) 105146293-105279816 protein_coding
ENSG00000168772 (CXXC4)
CXXC finger protein 4 		ENST00000394767 (CXXC4-001) 104468312-104494894 protein_coding
ENST00000466963 (CXXC4-002) 104469514-104494901 processed_transcript
ENST00000515509 (CXXC4-004) 104472175-104475258 processed_transcript
ENSG00000244470 (RP11-395M19.1)
 ENST00000474399 (RP11-395M19.1-001) 104886118-104886955 processed_pseudogene
ENSG00000245384 (AC004053.1)
 ENST00000500179 (AC004053.1-001) 104490965-104697592 antisense
ENSG00000248242 (RP11-556I14.2)
 ENST00000515127 (RP11-556I14.2-001) 104653874-104966793 lincRNA
ENSG00000248373 (RP11-556I14.1)
 ENST00000506148 (RP11-556I14.1-001) 104907357-105116845 lincRNA
ENST00000506386 (RP11-556I14.1-002) 104973712-105120000 lincRNA
ENST00000515649 (RP11-556I14.1-003) 104907406-104970084 lincRNA
ENSG00000250670 (AC004063.1)
 ENST00000508358 (AC004063.1-001) 104556960-104568877 lincRNA
ENSG00000251259 (AC004069.2)
 ENST00000504082 (AC004069.2-001) 105137280-105140619 lincRNA
ENSG00000251473 (AC004069.1)
 ENST00000505438 (AC004069.1-001) 105102891-105104004 processed_pseudogene
ENSG00000251586 (TET2-AS1)
TET2 antisense RNA 1 		ENST00000515414 (TET2-AS1-001) 105171354-105178063 antisense
ENSG00000251906 (RNU6-351P)
RNA, U6 small nuclear 351, pseudogene 		ENST00000516097 (RNU6-351P-201) 104974672-104974771 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002E_0001ENSDARG00000076928ENSDART00000113020ENSDARG00000077817ENSDART00000112899ENSDARG00000084721ENSDART00000120121CIL_00002E_0002ENSG00000168769ENST00000265149ENST00000305737ENST00000380013ENST00000394764ENST00000413648ENST00000504042ENST00000505801ENST00000513237ENST00000514870ENST00000540549ENSG00000168772ENST00000394767ENST00000466963ENST00000515509ENSG00000244470ENST00000474399ENSG00000245384ENST00000500179ENSG00000248242ENST00000515127ENSG00000248373ENST00000506148ENST00000506386ENST00000515649ENSG00000250670ENST00000508358ENSG00000251259ENST00000504082ENSG00000251473ENST00000505438ENSG00000251586ENST00000515414ENSG00000251906ENST00000516097
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002E_0001ENSDARG00000076928ENSDART00000113020ENSDARG00000077817ENSDART00000112899ENSDARG00000084721ENSDART00000120121CIL_00002E_0002ENSG00000168769ENST00000265149ENST00000305737ENST00000380013ENST00000394764ENST00000513237ENSG00000168772ENST00000394767ENST00000466963ENSG00000244470ENST00000474399ENSG00000245384ENST00000500179ENSG00000248242ENST00000515127ENSG00000248373ENST00000506148ENST00000506386ENST00000515649ENSG00000250670ENST00000508358ENSG00000251259ENST00000504082ENSG00000251473ENST00000505438ENSG00000251586ENST00000515414ENSG00000251906ENST00000516097
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076928 ENSDART00000113020 N/A N/A N/A 4.978±1.98 N/A N/A 1.989±0.45 1.649±0.15 0.232±0.00 N/A 0.804±0.00 N/A N/A N/A
ENSDARG00000077817 ENSDART00000112899 N/A N/A N/A 3.114±0.00 N/A N/A N/A 0.103±0.00 N/A N/A 0.172±0.00 N/A N/A N/A
ENSDARG00000084721 ENSDART00000120121 N/A N/A N/A N/A N/A N/A 1.520±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168769 ENST00000265149 0.511±0.00 0.530±0.00 N/A 0.487±0.00 0.539±0.00 1.262±0.90 0.221±0.00 0.455±0.00 0.130±0.00 0.853±0.00 0.416±0.00 0.353±0.04 0.228±0.00 N/A
ENST00000305737 0.513±0.00 0.261±0.00 N/A N/A 0.828±0.00 0.481±0.22 0.657±0.00 N/A N/A N/A N/A 0.209±0.00 N/A 0.286±0.00
ENST00000380013 N/A 0.219±0.00 N/A 0.699±0.37 1.439±0.81 0.138±0.00 0.750±0.13 1.263±0.00 0.292±0.00 2.611±0.00 0.554±0.00 0.766±0.55 0.776±0.00 0.541±0.33
ENST00000394764 N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A 1.604±0.08 0.541±0.27 N/A N/A N/A
ENST00000413648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513237 N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.617±0.20 0.415±0.23 N/A
ENST00000514870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168772 ENST00000394767 0.324±0.00 0.039±0.00 N/A 1.039±0.03 0.441±0.13 0.385±0.30 0.294±0.02 0.303±0.00 0.050±0.00 0.254±0.03 0.009±0.00 0.229±0.11 0.121±0.04 0.612±0.09
ENST00000466963 N/A 0.042±0.00 N/A N/A N/A 0.218±0.00 N/A N/A 0.044±0.00 N/A 0.011±0.00 0.061±0.00 0.185±0.00 1.812±0.00
ENST00000515509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244470 ENST00000474399 N/A N/A 0.552±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00
ENSG00000245384 ENST00000500179 N/A 0.114±0.00 0.110±0.00 N/A N/A N/A N/A 0.106±0.00 0.052±0.00 N/A N/A N/A N/A N/A
ENSG00000248242 ENST00000515127 N/A N/A 0.252±0.00 N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248373 ENST00000506148 N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A N/A N/A 0.171±0.10
ENST00000506386 N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A 0.213±0.00 0.120±0.00
ENST00000515649 N/A N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000250670 ENST00000508358 N/A 0.284±0.00 N/A 0.070±0.00 0.097±0.00 0.029±0.00 0.088±0.00 0.095±0.00 N/A N/A 0.027±0.00 0.051±0.00 0.082±0.00 0.263±0.00
ENSG00000251259 ENST00000504082 0.019±0.00 0.135±0.00 N/A 0.076±0.00 0.055±0.00 0.017±0.00 0.036±0.00 0.094±0.00 N/A 0.051±0.00 0.052±0.00 0.134±0.10 0.644±0.37 0.343±0.12
ENSG00000251473 ENST00000505438 N/A N/A 0.441±0.00 N/A N/A N/A 0.131±0.00 N/A N/A N/A 0.093±0.00 0.311±0.00 N/A 0.037±0.00
ENSG00000251586 ENST00000515414 0.156±0.00 0.292±0.00 N/A 0.023±0.00 0.109±0.00 N/A 0.120±0.00 0.108±0.00 0.056±0.00 0.187±0.00 0.171±0.00 0.080±0.01 0.076±0.00 0.089±0.01
ENSG00000251906 ENST00000516097 N/A N/A N/A N/A N/A N/A N/A 2.240±0.00 N/A N/A N/A N/A N/A N/A

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