C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001MD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120832-ENSG00000008405 CGP 9606 12:106977291-107093829
GeneTranscriptPositionBiotype
ENSG00000008405 (CRY1)
cryptochrome circadian clock 1 		ENST00000008527 (CRY1-001) 106991364-107093829 protein_coding
ENST00000546722 (CRY1-005) 106999789-107001851 retained_intron
ENST00000549356 (CRY1-004) 106992487-106997539 protein_coding
ENST00000550633 (CRY1-003) 107072935-107093513 processed_transcript
ENST00000552790 (CRY1-002) 106991367-107050359 retained_intron
ENSG00000120832 (MTERF2)
mitochondrial transcription termination factor 2 		ENST00000240050 (MTERF2-001) 106977291-106987166 protein_coding
ENST00000392830 (MTERF2-003) 106977291-106987149 protein_coding
ENST00000547115 (MTERF2-005) 106985753-106987160 processed_transcript
ENST00000548101 (MTERF2-007) 106978179-106987090 protein_coding
ENST00000550496 (MTERF2-006) 106978615-106987122 protein_coding
ENST00000550736 (MTERF2-008) 106978456-106985286 protein_coding
ENST00000552029 (MTERF2-002) 106977549-106987126 protein_coding
ENSG00000151135 (TMEM263)
transmembrane protein 263 		ENST00000280756 (TMEM263-002) 106955722-106973984 protein_coding
ENST00000547081 (TMEM263-007) 106956785-106971502 protein_coding
ENST00000547242 (TMEM263-004) 106955828-106971441 protein_coding
ENST00000548125 (TMEM263-001) 106955719-106974036 protein_coding
ENST00000548806 (TMEM263-008) 106971429-106978778 processed_transcript
ENST00000550344 (TMEM263-006) 106955867-106971576 protein_coding
ENST00000551237 (TMEM263-009) 106971471-106978757 processed_transcript
ENST00000551489 (TMEM263-005) 106955844-106971246 protein_coding
ENST00000551813 (TMEM263-003) 106966935-106972341 protein_coding
CIL_0001MD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049038-ENSMUSG00000020038 CGP 10090 10:85119435-85185054
GeneTranscriptPositionBiotype
ENSMUSG00000020038 (Cry1)
cryptochrome 1 (photolyase-like) 		ENSMUST00000020227 (Cry1-201) 85131702-85185054 protein_coding
ENSMUSG00000049038 (Mterfd3)
mitochondrial transcription termination factor 2 		ENSMUST00000050813 (Mterfd3-201) 85119435-85128027 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MD_0001ENSG00000008405ENST00000008527ENST00000546722ENST00000549356ENST00000550633ENST00000552790ENSG00000120832ENST00000240050ENST00000392830ENST00000547115ENST00000548101ENST00000550496ENST00000550736ENST00000552029ENSG00000151135ENST00000280756ENST00000547081ENST00000547242ENST00000548125ENST00000548806ENST00000550344ENST00000551237ENST00000551489ENST00000551813CIL_0001MD_0002ENSMUSG00000020038ENSMUST00000020227ENSMUSG00000049038ENSMUST00000050813
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MD_0001ENSG00000008405ENST00000008527ENST00000549356ENST00000552790ENSG00000120832ENST00000240050ENST00000392830ENST00000552029ENSG00000151135ENST00000280756ENST00000548125CIL_0001MD_0002ENSMUSG00000020038ENSMUST00000020227ENSMUSG00000049038ENSMUST00000050813
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008405 ENST00000008527 4.565±0.00 3.550±0.00 2.049±0.00 3.963±2.00 4.134±0.19 2.364±1.48 1.994±1.05 4.220±3.09 2.379±0.89 4.114±2.55 1.286±0.80 5.510±3.19 4.620±1.11 30.288±14.84
ENST00000546722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549356 N/A N/A N/A N/A N/A 2.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552790 N/A N/A 0.317±0.00 N/A 0.583±0.00 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A
ENSG00000120832 ENST00000240050 N/A N/A 1.931±0.00 2.499±0.00 N/A 3.086±1.40 3.068±0.00 N/A N/A N/A 1.050±0.00 4.868±0.00 N/A N/A
ENST00000392830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.729±0.00 N/A N/A 3.723±0.00
ENST00000547115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552029 N/A 1.988±0.00 0.881±0.00 2.025±0.00 1.707±0.00 N/A N/A 1.684±0.00 1.121±0.00 1.501±0.00 N/A 3.176±0.92 N/A 4.289±0.00
ENSG00000151135 ENST00000280756 2.166±0.00 1.638±0.00 N/A 2.981±1.73 1.891±0.00 N/A 1.813±0.00 4.108±0.91 1.778±0.00 2.215±0.07 3.228±0.00 3.315±0.15 3.095±0.35 N/A
ENST00000547081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548125 9.220±0.00 5.291±0.00 1.808±0.00 4.875±0.00 5.520±2.07 6.230±5.19 5.100±1.39 9.472±7.33 7.242±3.78 5.588±4.06 0.432±0.00 8.404±3.46 9.396±3.81 13.524±5.15
ENST00000548806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020038 ENSMUST00000020227 2.788±1.30 3.969±1.26 5.639±2.80 6.339±1.85 4.609±2.81 11.174±4.77 1.847±0.40 0.978±0.19 3.493±1.00 4.412±0.44 5.307±1.20 10.195±5.11 4.510±1.03 10.513±2.72
ENSMUSG00000049038 ENSMUST00000050813 1.317±0.37 0.578±0.18 2.741±0.14 4.914±0.91 1.322±0.81 1.077±0.41 4.716±0.72 1.633±0.53 1.811±1.29 1.531±0.24 4.742±0.70 1.529±1.23 3.553±1.34 1.445±0.49

Loading