C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000235_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061890-ENSDARG00000092713 CGP 7955 23:24798756-24834903
GeneTranscriptPositionBiotype
ENSDARG00000061890 (atp13a2)
ATPase type 13A2 		ENSDART00000088777 (atp13a2-001) 24798756-24830291 protein_coding
ENSDART00000132265 (atp13a2-002) 24827818-24829495 protein_coding
ENSDARG00000092713 (SDHB (2 of 2))
succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 		ENSDART00000134410 (SDHB (2 of 2)-001) 24832578-24834903 protein_coding
CIL_000235_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159363-ENSG00000117118 CGP 9606 1:16985958-17054170
GeneTranscriptPositionBiotype
ENSG00000117118 (SDHB)
succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 		ENST00000375499 (SDHB-001) 17018722-17054170 protein_coding
ENST00000463045 (SDHB-006) 17027749-17052488 protein_coding
ENST00000466613 (SDHB-005) 17032530-17054031 retained_intron
ENST00000475049 (SDHB-002) 17018752-17023160 processed_transcript
ENST00000475506 (SDHB-004) 17027656-17044877 retained_intron
ENST00000485092 (SDHB-007) 17018752-17023036 retained_intron
ENST00000485515 (SDHB-003) 17022608-17054007 processed_transcript
ENST00000491274 (SDHB-008) 17023973-17045219 protein_coding
ENSG00000159363 (ATP13A2)
ATPase type 13A2 		ENST00000326735 (ATP13A2-001) 16985958-17011772 protein_coding
ENST00000341676 (ATP13A2-002) 16985958-17011915 protein_coding
ENST00000452699 (ATP13A2-005) 16985958-17011928 protein_coding
ENST00000463860 (ATP13A2-003) 16995487-17000847 retained_intron
ENST00000466561 (ATP13A2-004) 16985959-16991858 retained_intron
ENST00000502418 (ATP13A2-007) 16985981-16990003 protein_coding
ENST00000502860 (ATP13A2-006) 16995859-17000291 retained_intron
ENST00000503552 (ATP13A2-014) 16990175-16996283 protein_coding
ENST00000506174 (ATP13A2-012) 16996087-17000312 protein_coding
ENST00000508222 (ATP13A2-008) 17000283-17005395 protein_coding
ENST00000509392 (ATP13A2-013) 16996034-16996694 retained_intron
ENST00000509619 (ATP13A2-010) 17002320-17005765 protein_coding
ENST00000510069 (ATP13A2-009) 17000011-17005714 protein_coding
ENST00000511957 (ATP13A2-011) 17000269-17005072 protein_coding
ENST00000617114 (ATP13A2-201) 16995859-17011928 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000235_0001ENSDARG00000061890ENSDART00000088777ENSDART00000132265ENSDARG00000092713ENSDART00000134410CIL_000235_0002ENSG00000117118ENST00000375499ENST00000463045ENST00000466613ENST00000475049ENST00000475506ENST00000485092ENST00000485515ENST00000491274ENSG00000159363ENST00000326735ENST00000341676ENST00000452699ENST00000463860ENST00000466561ENST00000502418ENST00000502860ENST00000503552ENST00000506174ENST00000508222ENST00000509392ENST00000509619ENST00000510069ENST00000511957ENST00000617114
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000235_0001ENSDARG00000061890ENSDART00000088777ENSDARG00000092713ENSDART00000134410CIL_000235_0002ENSG00000117118ENST00000375499ENST00000475506ENST00000485515ENST00000491274ENSG00000159363ENST00000326735ENST00000341676ENST00000452699ENST00000463860ENST00000466561ENST00000502418ENST00000503552ENST00000509619ENST00000510069ENST00000511957ENST00000617114
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061890 ENSDART00000088777 N/A N/A N/A 1.561±0.81 N/A N/A 1.208±1.13 0.917±1.12 N/A N/A 0.721±0.00 N/A N/A N/A
ENSDART00000132265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092713 ENSDART00000134410 N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117118 ENST00000375499 14.286±0.00 12.514±0.00 1.298±0.00 15.918±1.67 8.931±1.97 10.011±1.22 48.132±29.79 35.226±10.20 32.643±29.74 20.103±0.00 36.995±7.03 25.910±13.81 35.236±8.50 17.267±9.44
ENST00000463045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475506 N/A N/A N/A N/A N/A 15.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485515 15.707±0.00 22.818±0.00 N/A 24.470±0.00 27.616±0.00 18.130±0.00 60.295±0.00 49.567±0.00 50.236±0.00 17.709±0.00 30.462±0.00 N/A 10.830±0.00 22.197±0.00
ENST00000491274 N/A N/A 3.332±0.00 7.709±0.00 N/A N/A 20.287±0.00 11.468±0.00 6.045±0.00 3.042±0.00 14.404±0.00 26.003±14.69 23.141±0.00 24.706±0.00
ENSG00000159363 ENST00000326735 7.624±0.00 8.324±0.00 0.258±0.00 8.374±3.95 4.646±0.00 2.515±0.00 N/A 3.116±0.00 N/A N/A N/A 6.175±3.36 9.086±4.12 4.956±0.00
ENST00000341676 N/A N/A N/A N/A 0.684±0.00 N/A 0.098±0.00 N/A N/A N/A 0.194±0.00 2.748±0.00 N/A N/A
ENST00000452699 5.069±0.00 N/A N/A 8.441±6.72 5.220±0.00 N/A 0.954±0.00 1.469±0.00 1.071±0.00 4.758±0.00 6.552±0.00 2.636±0.84 3.898±0.73 3.071±0.64
ENST00000463860 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466561 N/A 11.573±0.00 N/A 3.336±0.00 4.821±0.00 N/A N/A 0.156±0.00 N/A 9.301±0.00 3.181±0.00 3.006±1.89 N/A 3.978±0.00
ENST00000502418 N/A N/A N/A 27.306±0.00 N/A 3.872±0.00 1.283±0.00 7.618±0.00 1.789±0.00 N/A 4.502±0.00 17.661±0.00 11.786±0.00 4.482±0.00
ENST00000502860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503552 N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A 0.890±0.00 N/A 17.033±14.91 12.668±0.00 6.297±0.00
ENST00000506174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509619 N/A N/A N/A N/A N/A N/A 0.816±0.00 N/A 0.588±0.00 1.320±0.00 N/A N/A N/A N/A
ENST00000510069 N/A N/A 0.857±0.00 N/A N/A 1.667±0.00 N/A N/A 0.624±0.00 N/A N/A N/A N/A N/A
ENST00000511957 N/A N/A N/A N/A 3.748±0.00 N/A N/A N/A N/A 1.352±0.00 N/A N/A N/A N/A
ENST00000617114 N/A N/A N/A N/A N/A 0.717±0.00 N/A 0.080±0.00 0.218±0.00 N/A N/A N/A N/A N/A

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