C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044528-ENSDARG00000016311 CGP 7955 6:12468347-12700459
GeneTranscriptPositionBiotype
ENSDARG00000016311 (dock9b)
dedicator of cytokinesis 9b 		ENSDART00000090174 (dock9b-201) 12506792-12634280 protein_coding
ENSDART00000153797 (dock9b-002) 12536979-12556483 protein_coding
ENSDART00000156415 (dock9b-001) 12505906-12700459 protein_coding
ENSDARG00000044528 (slc15a1b)
solute carrier family 15 (oligopeptide transporter), member 1b 		ENSDART00000047896 (slc15a1b-001) 12468347-12499964 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004FT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088386-ENSG00000088387 CGP 9606 13:98683801-99086625
GeneTranscriptPositionBiotype
ENSG00000088386 (SLC15A1)
solute carrier family 15 (oligopeptide transporter), member 1 		ENST00000376494 (SLC15A1-002) 98720527-98726567 retained_intron
ENST00000376503 (SLC15A1-001) 98683801-98752654 protein_coding
ENST00000613008 (SLC15A1-201) 98720527-98726567 protein_coding
ENST00000618992 (SLC15A1-202) 98684631-98752654 protein_coding
ENSG00000088387 (DOCK9)
dedicator of cytokinesis 9 		ENST00000339416 (DOCK9-201) 98793487-99086406 protein_coding
ENST00000340449 (DOCK9-009) 98809309-98847684 protein_coding
ENST00000376460 (DOCK9-001) 98793487-98977990 protein_coding
ENST00000400228 (DOCK9-010) 98793487-98831793 protein_coding
ENST00000419908 (DOCK9-013) 98800288-98829455 protein_coding
ENST00000427887 (DOCK9-002) 98922051-99086625 protein_coding
ENST00000442173 (DOCK9-202) 98793487-98978084 protein_coding
ENST00000448493 (DOCK9-203) 98793487-99086406 protein_coding
ENST00000449796 (DOCK9-007) 98831396-98855984 protein_coding
ENST00000450257 (DOCK9-006) 98831774-98850080 protein_coding
ENST00000451563 (DOCK9-012) 98807661-98829366 protein_coding
ENST00000461998 (DOCK9-008) 98860181-98863548 processed_transcript
ENST00000472874 (DOCK9-005) 98845948-98860476 processed_transcript
ENST00000473165 (DOCK9-004) 98888135-98888685 processed_transcript
ENST00000479769 (DOCK9-003) 98955435-99086393 processed_transcript
ENST00000481051 (DOCK9-011) 98810259-98829496 processed_transcript
ENSG00000229918 (DOCK9-AS1)
DOCK9 antisense RNA 1 		ENST00000439367 (DOCK9-AS1-001) 98832084-98834629 antisense
ENSG00000231981 (RPL7L1P12)
ribosomal protein L7-like 1 pseudogene 12 		ENST00000417594 (RPL7L1P12-001) 98949719-98950447 processed_pseudogene
ENSG00000275919 (RP11-155N3.4)
 ENST00000619393 (RP11-155N3.4-001) 98871742-98872005 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004FT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025557-ENSMUSG00000025558 CGP 10090 14:121459621-121797734
GeneTranscriptPositionBiotype
ENSMUSG00000025557 (Slc15a1)
solute carrier family 15 (oligopeptide transporter), member 1 		ENSMUST00000088386 (Slc15a1-201) 121459621-121505254 protein_coding
ENSMUSG00000025558 (Dock9)
dedicator of cytokinesis 9 		ENSMUST00000040700 (Dock9-201) 121542039-121698417 protein_coding
ENSMUST00000100299 (Dock9-202) 121542039-121797734 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FT_0001ENSDARG00000016311ENSDART00000090174ENSDART00000153797ENSDART00000156415ENSDARG00000044528ENSDART00000047896CIL_0004FT_0002ENSG00000088386ENST00000376494ENST00000376503ENST00000613008ENST00000618992ENSG00000088387ENST00000339416ENST00000340449ENST00000376460ENST00000400228ENST00000419908ENST00000427887ENST00000442173ENST00000448493ENST00000449796ENST00000450257ENST00000451563ENST00000461998ENST00000472874ENST00000473165ENST00000479769ENST00000481051ENSG00000229918ENST00000439367ENSG00000231981ENST00000417594ENSG00000275919ENST00000619393CIL_0004FT_0003ENSMUSG00000025557ENSMUST00000088386ENSMUSG00000025558ENSMUST00000040700ENSMUST00000100299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FT_0001ENSDARG00000016311ENSDART00000090174ENSDART00000156415ENSDARG00000044528ENSDART00000047896CIL_0004FT_0002ENSG00000088386ENST00000376494ENST00000376503ENST00000618992ENSG00000088387ENST00000339416ENST00000376460ENST00000400228ENST00000442173ENST00000448493ENSG00000229918ENST00000439367ENSG00000231981ENST00000417594ENSG00000275919ENST00000619393CIL_0004FT_0003ENSMUSG00000025557ENSMUST00000088386ENSMUSG00000025558ENSMUST00000040700ENSMUST00000100299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016311 ENSDART00000090174 N/A N/A N/A 0.951±0.18 N/A N/A 1.546±0.00 1.500±0.00 0.051±0.00 N/A 0.709±0.00 N/A N/A N/A
ENSDART00000153797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156415 N/A N/A N/A 0.692±0.00 N/A N/A 0.210±0.00 N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENSDARG00000044528 ENSDART00000047896 N/A N/A N/A 0.180±0.09 N/A N/A 0.188±0.05 3.035±0.00 0.178±0.00 N/A 0.025±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088386 ENST00000376494 0.089±0.00 N/A N/A 0.096±0.00 0.103±0.00 0.105±0.01 0.082±0.00 N/A N/A 0.062±0.00 0.127±0.10 0.018±0.00 N/A 0.131±0.00
ENST00000376503 0.209±0.00 0.322±0.00 N/A 0.172±0.00 0.157±0.00 0.155±0.00 0.049±0.00 3.616±0.94 3.557±0.00 0.116±0.00 0.012±0.00 2.219±1.99 0.150±0.09 0.234±0.19
ENST00000613008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618992 N/A N/A N/A N/A N/A 0.097±0.00 N/A 2.779±0.00 0.050±0.00 0.072±0.00 N/A N/A N/A N/A
ENSG00000088387 ENST00000339416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A N/A N/A
ENST00000340449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376460 N/A N/A N/A 3.253±1.64 N/A N/A N/A N/A N/A N/A N/A N/A 8.132±0.00 N/A
ENST00000400228 31.229±0.00 10.377±0.00 N/A 6.000±0.00 9.569±0.00 9.612±0.00 4.355±0.00 7.719±0.00 2.055±0.00 9.778±0.00 0.805±0.00 8.267±4.41 12.367±5.38 5.625±1.61
ENST00000419908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442173 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.871±0.00 N/A N/A N/A N/A
ENST00000448493 N/A N/A N/A 2.417±0.00 N/A N/A 3.382±0.00 N/A 0.630±0.00 2.999±0.00 0.420±0.00 5.296±0.00 N/A 0.752±0.00
ENST00000449796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229918 ENST00000439367 N/A N/A N/A 0.557±0.00 N/A 0.177±0.00 0.033±0.00 1.917±0.00 0.182±0.05 1.378±0.00 N/A 0.261±0.00 0.253±0.00 N/A
ENSG00000231981 ENST00000417594 N/A 0.151±0.00 N/A 0.140±0.03 0.643±0.00 0.368±0.00 0.088±0.00 0.019±0.00 0.185±0.00 0.921±0.89 N/A 0.072±0.04 0.099±0.00 N/A
ENSG00000275919 ENST00000619393 0.860±0.00 N/A N/A N/A 0.382±0.00 0.347±0.00 N/A N/A N/A N/A N/A N/A 1.479±0.00 0.107±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025557 ENSMUST00000088386 0.230±0.18 0.083±0.05 0.023±0.00 0.014±0.01 0.116±0.10 28.249±6.76 0.014±0.00 0.142±0.08 0.018±0.01 0.983±0.53 0.048±0.00 3.083±0.95 0.318±0.20 0.321±0.22
ENSMUSG00000025558 ENSMUST00000040700 2.740±1.11 N/A 6.885±4.32 2.818±1.37 2.270±0.70 3.301±0.00 1.247±0.08 6.916±2.09 0.550±0.21 5.940±1.27 0.941±0.20 6.804±2.88 7.078±4.06 0.292±0.05
ENSMUST00000100299 3.673±1.88 1.161±0.24 6.923±1.06 6.027±1.82 3.392±1.60 1.863±0.63 3.090±0.85 2.872±1.01 0.443±0.23 16.396±2.43 2.559±1.26 7.068±2.59 4.085±1.52 0.183±0.01

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