C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000105896 atp2a1l-001 ENSDARG00000035458 7955 + 12:14350228-14367789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105896
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105896 4.854±2.38 0.790±0.30 213.063±154.50 1.792±0.00 6852.500±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031423 Atp2a2-201 protein_coding Mus_musculus 0 1262
ENSMUST00000032974 Atp2a1-001 protein_coding Mus_musculus 0 1550
ENSMUST00000177974 Atp2a2-202 protein_coding Mus_musculus 0 1262
ENSMUST00000179939 Atp2a2-203 protein_coding Mus_musculus 0 1262

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