C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109953 ppfia3-201 ENSDARG00000077053 7955 - 3:30193895-30251434 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000109953
Transcript ID Brain Heart Kidney Liver
ENSDART00000109953 23.403±9.13 0.025±0.00 1.168±0.92 0.052±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003961 Ppfia3-201 protein_coding Mus_musculus 2e-30 139
ENSMUST00000107779 Ppfia3-001 protein_coding Mus_musculus 2e-30 139
ENSMUST00000131154 Ppfia3-002 retained_intron Mus_musculus 2e-30 139
ENSMUST00000137578 Ppfia3-003 protein_coding Mus_musculus 2e-20 106

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