C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 2, group F, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130163 nr2f2-001 ENSDARG00000040926 7955 - 18:23652345-23659065 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130163
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130163 15.903±11.29 2.878±1.47 0.886±0.00 0.888±0.00 1.771±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O7 CIL_0007O7_0004 UCNEbase 18:23296717-24206341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001946 IMP lymphangiogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0060838 IMP lymphatic endothelial cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032768 Nr2f2-001 protein_coding Mus_musculus 0 894
ENSMUST00000089565 Nr2f2-002 protein_coding Mus_musculus 0 647
ENSMUST00000091458 Nr2f1-001 protein_coding Mus_musculus 0 745
ENSMUST00000125176 Nr2f1-002 protein_coding Mus_musculus 0 501
ENSMUST00000127137 Nr2f1-004 protein_coding Mus_musculus 0 501
ENSMUST00000150498 Nr2f1-003 protein_coding Mus_musculus 0 501
ENST00000394166 NR2F2-001 protein_coding Homo_sapiens 0 894
ENST00000394171 NR2F2-201 protein_coding Homo_sapiens 0 647
ENST00000421109 NR2F2-002 protein_coding Homo_sapiens 0 647
ENST00000453270 NR2F2-003 protein_coding Homo_sapiens 0 649
ENST00000559679 NR2F2-004 protein_coding Homo_sapiens 0 226

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