C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-related developmental regulator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000010192 Ifrd2-201 ENSMUSG00000010048 10090 + 9:107587718-107593038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010192 17.681±5.86 23.848±1.85 15.477±1.77 4.919±2.56 14.538±4.25 18.799±3.83 17.841±0.62 20.270±2.95 59.889±43.19 13.653±2.69 13.822±3.63 17.047±6.88 15.781±8.41 5.376±2.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000414734 IFRD2-003 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000417626 IFRD2-001 protein_coding Homo_sapiens 0 1652
ENST00000436390 IFRD2-002 protein_coding Homo_sapiens 0 1592
ENST00000438296 IFRD2-010 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000464258 IFRD2-013 retained_intron Homo_sapiens 0 641
ENST00000474556 IFRD2-004 retained_intron Homo_sapiens 0 1088
ENST00000483071 IFRD2-009 retained_intron Homo_sapiens 0 381
ENST00000489569 IFRD2-008 retained_intron Homo_sapiens 2e-40 171

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