C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase domain containing associated with muscle regeneration 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028612 Pamr1-001 ENSMUSG00000027188 10090 + 2:102550012-102643041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028612 14.856±5.86 0.630±0.10 26.815±2.34 1.645±0.98 13.794±2.40 8.429±1.78 1.670±0.18 2.472±0.19 1.541±0.71 6.702±1.50 0.613±0.26 8.054±1.89 1.615±1.17 0.387±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZW CIL_0008ZW_0002 VISTA 2:102019035-102620194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000527605 PAMR1-005 protein_coding Homo_sapiens 0 1391
ENST00000529303 PAMR1-007 protein_coding Homo_sapiens 0 449
ENST00000534803 PAMR1-004 processed_transcript Homo_sapiens 0 902
ENST00000611014 PAMR1-201 protein_coding Homo_sapiens 0 2296
ENST00000615849 PAMR1-202 protein_coding Homo_sapiens 0 1598
ENST00000619888 PAMR1-001 protein_coding Homo_sapiens 0 2423
ENST00000621476 PAMR1-003 protein_coding Homo_sapiens 0 2305
ENST00000622144 PAMR1-002 protein_coding Homo_sapiens 0 1465

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