C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THUMP domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033236 Thumpd1-201 ENSMUSG00000030942 10090 - 7:119715096-119720765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033236 9.680±1.76 10.687±3.36 13.023±0.63 15.676±3.60 10.196±2.36 6.013±0.81 5.123±0.18 6.462±0.82 8.865±4.28 7.940±0.66 7.148±0.99 16.220±4.85 18.302±6.65 6.708±1.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381337 THUMPD1-001 protein_coding Homo_sapiens 0 1086
ENST00000396083 THUMPD1-002 protein_coding Homo_sapiens 0 1086
ENST00000400014 THUMPD1P1-001 processed_pseudogene Homo_sapiens 0 743
ENST00000565248 THUMPD1-005 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000569768 THUMPD1-004 retained_intron Homo_sapiens 0 486
ENST00000570231 THUMPD1-003 retained_intron Homo_sapiens 0 604

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