C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047951 Fbxo2-001 ENSMUSG00000041556 10090 + 4:148160621-148166424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047951 0.139±0.06 1.670±0.63 2.188±0.18 48.236±66.25 0.556±0.17 0.728±0.11 0.215±0.08 0.836±0.20 0.076±0.03 0.929±0.17 0.195±0.10 0.910±0.30 0.711±0.51 25.241±7.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001540 IDA beta-amyloid binding
GO:0001948 IDA glycoprotein binding
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0006516 IDA glycoprotein catabolic process
GO:0008285 IEA negative regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0030246 IDA carbohydrate binding
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031396 IDA regulation of protein ubiquitination
GO:0043197 IDA dendritic spine
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354287 FBXO2-001 protein_coding Homo_sapiens 0 1013
ENST00000465901 FBXO2-005 protein_coding Homo_sapiens 0 292
ENST00000466919 FBXO2-002 retained_intron Homo_sapiens 0 553
ENST00000471501 FBXO2-004 retained_intron Homo_sapiens 0 641

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