C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053663 Wdr36-201 ENSMUSG00000038299 10090 + 18:32837225-32866420 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053663
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053663 1.360±0.56 5.246±1.05 3.832±1.66 1.497±0.45 0.707±0.00 1.288±0.17 1.988±0.95 3.353±2.11 1.809±0.98 1.824±0.39 4.022±1.54 4.298±1.93 0.823±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V0 CIL_0007V0_0002 VISTA 18:32241944-32843241
CIL_0004UR CIL_0004UR_0002 CGP 18:32815383-32866420
CIL_0004UQ CIL_0004UQ_0002 CGP 18:32837225-33195767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IMP retina homeostasis
GO:0005575 ND cellular_component
GO:0006364 IEA rRNA processing
GO:0030516 IMP regulation of axon extension
GO:0032040 IEA small-subunit processome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000505303 WDR36-007 retained_intron Homo_sapiens 0 2045
ENST00000506538 WDR36-001 protein_coding Homo_sapiens 0 3038
ENST00000513710 WDR36-010 protein_coding Homo_sapiens 0 3038
ENST00000515784 WDR36-003 retained_intron Homo_sapiens 0 239
ENST00000612402 WDR36-201 protein_coding Homo_sapiens 0 3038

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