C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein 5 complex, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089506 Ap5s1-001 ENSMUSG00000068264 10090 + 2:131210440-131213514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaENSMUST00000089506
Transcript ID Breast Liver Ovary Placenta
ENSMUST00000089506 4.437±0.00 2.520±0.00 2.394±0.00 1.582±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034Y CIL_00034Y_0002 CGP 2:131186949-131213514
CIL_00034V CIL_00034V_0002 CGP 2:131207078-131248025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005770 IEA late endosome
GO:0016197 IEA endosomal transport
GO:0030119 IEA AP-type membrane coat adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246041 AP5S1-201 protein_coding Homo_sapiens 0 448
ENST00000379567 AP5S1-004 protein_coding Homo_sapiens 0 444
ENST00000379573 AP5S1-003 protein_coding Homo_sapiens 0 420
ENST00000615891 AP5S1-001 protein_coding Homo_sapiens 0 440

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