C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STE20-related kinase adaptor alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103072 Strada-001 ENSMUSG00000069631 10090 - 11:106163848-106193562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyOvaryTestisENSMUST00000103072
Transcript ID Adipose Breast Colon Kidney Ovary Testis
ENSMUST00000103072 6.146±1.64 7.664±2.69 2.816±0.84 7.178±0.20 6.048±1.04 32.486±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006611 ISS protein export from nucleus
GO:0007049 IEA cell cycle
GO:0030295 ISS protein kinase activator activity
GO:0032147 IDA:ISS activation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245865 STRADA-005 protein_coding Homo_sapiens 0 837
ENST00000336174 STRADA-001 protein_coding Homo_sapiens 0 1395
ENST00000375840 STRADA-007 protein_coding Homo_sapiens 0 1395
ENST00000392950 STRADA-003 protein_coding Homo_sapiens 0 1301
ENST00000447001 STRADA-004 protein_coding Homo_sapiens 0 933
ENST00000577375 STRADA-021 retained_intron Homo_sapiens 0 553
ENST00000579340 STRADA-016 protein_coding Homo_sapiens 0 551
ENST00000580039 STRADA-023 processed_transcript Homo_sapiens 0 1144
ENST00000580338 STRADA-009 protein_coding Homo_sapiens 0 340
ENST00000580553 RP11-51F16.8-001 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000581243 STRADA-015 nonsense_mediated_decay Homo_sapiens 0 752
ENST00000581505 STRADA-024 processed_transcript Homo_sapiens 0 451
ENST00000582137 STRADA-006 protein_coding Homo_sapiens 0 1046
ENST00000617949 STRADA-201 protein_coding Homo_sapiens 0 837

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