C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108917 Phactr3-001 ENSMUSG00000027525 10090 + 2:178118975-178338492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLungOvaryENSMUST00000108917
Transcript ID Adipose Adrenal Colon Lung Ovary
ENSMUST00000108917 0.014±0.00 0.046±0.00 0.075±0.00 0.059±0.00 0.158±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SC CIL_0001SC_0002 CGP 2:178118975-178407685

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133956 phactr3a-001 protein_coding Danio_rerio 0.0000000000001 84
ENST00000355648 PHACTR3-007 protein_coding Homo_sapiens 0 2193
ENST00000359926 PHACTR3-003 protein_coding Homo_sapiens 0 2228
ENST00000361300 PHACTR3-006 protein_coding Homo_sapiens 0 1500
ENST00000371015 PHACTR3-001 protein_coding Homo_sapiens 0 2191
ENST00000395636 PHACTR3-002 protein_coding Homo_sapiens 0 2189
ENST00000473657 PHACTR3-005 retained_intron Homo_sapiens 0 612
ENST00000492611 PHACTR3-004 retained_intron Homo_sapiens 0 992
ENST00000541461 PHACTR3-201 protein_coding Homo_sapiens 0 2191

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