| Transcript ID | Breast | Colon |
|---|---|---|
| ENSMUST00000112736 | 1.316±0.00 | 2.419±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | vacuolar protein sorting 4b (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000112736  |
Vps4b-002 |
ENSMUSG00000009907 |
10090 | - |
1:106764071-106796667  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000B7 | CIL_0000B7_0003 | CGP | 1:106720459-106796728 |
| CIL_00076J | CIL_00076J_0002 | CGP | 1:106764071-106883348 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005768 | ISO | endosome |
| GO:0005829 | IDA | cytosol |
| GO:0006813 | IDA | potassium ion transport |
| GO:0007032 | IMP | endosome organization |
| GO:0007049 | IEA | cell cycle |
| GO:0015031 | IEA | protein transport |
| GO:0016197 | ISO | endosomal transport |
| GO:0016887 | ISO | ATPase activity |
| GO:0030301 | IMP | cholesterol transport |
| GO:0051301 | IEA | cell division |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000238497
|
VPS4B-001 | protein_coding | Homo_sapiens | 0 | 1635 |
|
ENST00000588059
|
VPS4B-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 335 |
|
ENST00000589604
|
VPS4B-005 | retained_intron | Homo_sapiens | 0 | 918 |
|
ENST00000591383
|
VPS4B-007 | processed_transcript | Homo_sapiens | 0 | 632 |
|
ENST00000591475
|
VPS4B-006 | retained_intron | Homo_sapiens | 0 | 1363 |
|
ENST00000591519
|
VPS4B-003 | protein_coding | Homo_sapiens | 0 | 451 |
