C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113059 Adamts7-001 ENSMUSG00000032363 10090 + 9:90163069-90200100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000113059
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000113059 6.721±4.10 2.229±0.12 3.877±0.80 3.289±0.04 2.154±0.18 4.720±1.05 1.904±0.21 1.615±0.68 5.303±0.74 0.803±0.00 0.421±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Y CIL_00085Y_0002 VISTA 9:90013787-90616367
CIL_0008X0 CIL_0008X0_0002 VISTA 9:90119621-90721316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IDA proteolysis
GO:0008237 IDA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009986 IDA cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388820 ADAMTS7-001 protein_coding Homo_sapiens 0 2433
ENST00000561209 ADAMTS7P4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1061
ENST00000565793 ADAMTS7-004 retained_intron Homo_sapiens 0 1018
ENST00000566116 ADAMTS7P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 424
ENST00000566303 ADAMTS7-002 processed_transcript Homo_sapiens 0 769
ENST00000568712 ADAMTS7-003 retained_intron Homo_sapiens 0 1866
ENST00000569934 ADAMTS7-005 retained_intron Homo_sapiens 0 250
ENST00000613213 ADAMTS7P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1419

Loading