C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntrophin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115488 Sntg1-201 ENSMUSG00000025909 10090 - 1:8363475-8803943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000115488
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000115488 0.073±0.01 0.226±0.00 0.204±0.00 3.447±0.00 0.271±0.00 0.008±0.00 0.008±0.00 0.246±0.21 0.028±0.00 0.075±0.03 0.026±0.02 0.447±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276467 SNTG1-201 protein_coding Homo_sapiens 0 1487
ENST00000517473 SNTG1-003 protein_coding Homo_sapiens 0 1487
ENST00000518864 SNTG1-002 protein_coding Homo_sapiens 0 1818
ENST00000520825 SNTG1-004 nonsense_mediated_decay Homo_sapiens 0 1692
ENST00000522124 SNTG1-001 protein_coding Homo_sapiens 0 1818
ENST00000523085 SNTG1-008 protein_coding Homo_sapiens 0 324
ENST00000524004 SNTG1-009 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000620202 SNTG1-202 protein_coding Homo_sapiens 0 1818

Loading