C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeat kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137657 Lrrk2-004 ENSMUSG00000036273 10090 + 15:91808238-91816026 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungOvaryTestisENSMUST00000137657
Transcript ID Brain Breast Colon Liver Lung Ovary Testis
ENSMUST00000137657 0.148±0.01 1.219±0.34 0.582±0.06 0.276±0.12 2.973±0.09 0.891±0.27 0.381±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R2 CIL_0006R2_0002 CGP 15:91267696-91816120

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298910 LRRK2-004 protein_coding Homo_sapiens 0 523
ENST00000430804 LRRK2-005 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000479187 LRRK2-003 retained_intron Homo_sapiens 5e-34 152

Loading