C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM pointed domain containing ets transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138970 Spdef-002 ENSMUSG00000024215 10090 - 17:27719992-27728924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalHeartLiverMusclePlacentaENSMUST00000138970
Transcript ID Adipose Adrenal Heart Liver Muscle Placenta
ENSMUST00000138970 0.039±0.00 0.034±0.00 0.046±0.00 0.032±0.02 0.123±0.00 0.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LR CIL_0004LR_0003 CGP 17:27655509-27728951
CIL_0004LT CIL_0004LT_0003 CGP 17:27714352-27820558

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IDA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0010454 IMP negative regulation of cell fate commitment
GO:0010455 IMP positive regulation of cell fate commitment
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060480 IDA lung goblet cell differentiation
GO:0060576 IMP intestinal epithelial cell development

Homologs

No Homologs available.

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