C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thioredoxin domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145225 Txndc11-006 ENSMUSG00000022498 10090 - 16:11087235-11134573 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000145225
Transcript ID Adrenal Ovary
ENSMUST00000145225 7.725±1.56 8.796±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0003 CGP 16:10959275-11074983
CIL_00059Z CIL_00059Z_0002 CGP 16:11066298-11134650
CIL_0007DU CIL_0007DU_0002 CGP 16:11074911-11176393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283033 TXNDC11-001 protein_coding Homo_sapiens 0 992
ENST00000356957 TXNDC11-002 protein_coding Homo_sapiens 0 994
ENST00000572732 TXNDC11-004 retained_intron Homo_sapiens 0 743
ENST00000573174 TXNDC11-007 processed_transcript Homo_sapiens 0 678
ENST00000575591 TXNDC11-009 protein_coding Homo_sapiens 4e-30 135
ENST00000576969 TXNDC11-008 nonsense_mediated_decay Homo_sapiens 0 520

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