C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161608 Kctd18-002 ENSMUSG00000054770 10090 - 1:57955253-57969524 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161608
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161608 2.110±0.30 2.215±0.49 2.229±0.82 1.760±0.52 0.793±0.01 0.825±0.00 0.980±0.14 1.708±0.14 0.953±0.20 2.570±0.46 2.764±0.56 2.474±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B2 CIL_0002B2_0002 CGP 1:57774162-58018956
CIL_0002AZ CIL_0002AZ_0002 CGP 1:57955101-58025899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359878 KCTD18-001 protein_coding Homo_sapiens 0 989
ENST00000409157 KCTD18-002 protein_coding Homo_sapiens 0 989
ENST00000447556 KCTD18-005 processed_transcript Homo_sapiens 0 483
ENST00000468413 KCTD18-004 processed_transcript Homo_sapiens 0 839
ENST00000478816 KCTD18-003 retained_intron Homo_sapiens 0 669

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