C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline rich 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164688 Prr13-003 ENSMUSG00000023048 10090 + 15:102460083-102462776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000164688
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000164688 8.734±0.00 3.385±0.96 12.940±3.41 49.811±22.69 0.984±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379786 PRR13-003 protein_coding Homo_sapiens 0 244
ENST00000429243 PRR13-001 protein_coding Homo_sapiens 0 339
ENST00000546581 PRR13-008 protein_coding Homo_sapiens 2e-34 150
ENST00000547368 PRR13-011 protein_coding Homo_sapiens 0 339
ENST00000549068 PRR13-014 protein_coding Homo_sapiens 0 222
ENST00000549135 PRR13-007 protein_coding Homo_sapiens 0 339
ENST00000549581 PRR13-013 protein_coding Homo_sapiens 0 244
ENST00000549924 PRR13-009 protein_coding Homo_sapiens 0 300
ENST00000551003 PRR13-002 protein_coding Homo_sapiens 0 265
ENST00000577786 PRR13P4-001 processed_pseudogene Homo_sapiens 0 252
ENST00000596581 PRR13P5-001 processed_pseudogene Homo_sapiens 0 265
ENST00000605538 PRR13P7-001 processed_pseudogene Homo_sapiens 3.99931e-42 176

Loading