C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell migration inducing protein, hyaluronan binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220244 CEMIP-003 ENSG00000103888 9606 + 15:80779343-80951776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungOvaryENST00000220244
Transcript ID Brain Breast Colon Liver Lung Ovary
ENST00000220244 1.683±0.00 0.366±0.00 0.569±0.00 0.714±0.00 6.929±5.45 1.644±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XI CIL_0000XI_0002 CGP 15:80679684-80951776
CIL_00051G CIL_00051G_0002 CGP 15:80779343-80989878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004415 IDA hyalurononglucosaminidase activity
GO:0005515 IPI protein binding
GO:0005540 IDA hyaluronic acid binding
GO:0005576 IEA extracellular region
GO:0005634 IEA nucleus
GO:0005737 IMP cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005905 IEA coated pit
GO:0007605 IMP sensory perception of sound
GO:0010800 IDA positive regulation of peptidyl-threonine phosphorylation
GO:0030214 IMP hyaluronan catabolic process
GO:0030335 IDA positive regulation of cell migration
GO:0030665 IDA clathrin-coated vesicle membrane
GO:0032050 IDA clathrin heavy chain binding
GO:0046923 IDA ER retention sequence binding
GO:0051281 IDA positive regulation of release of sequestered calcium ion into cytosol
GO:0090314 IDA positive regulation of protein targeting to membrane
GO:1900020 IDA positive regulation of protein kinase C activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064174 Cemip-001 protein_coding Mus_musculus 0 4606
ENSMUST00000150495 Cemip-003 retained_intron Mus_musculus 0 3853
ENSMUST00000147578 Cemip-002 retained_intron Mus_musculus 0 2126
ENSMUST00000142518 Cemip-004 retained_intron Mus_musculus 0 1685
ENSMUST00000145171 Cemip-005 retained_intron Mus_musculus 5.99756e-43 182
ENSDART00000088011 tmem2-201 protein_coding Danio_rerio 0.00004 57
ENSDART00000133217 tmem2-001 protein_coding Danio_rerio 0.00004 57

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